Detail



ID : Ahg475053

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|475053|fgenesh2_kg.2__183__AT1G62990.1
Sequence
CTCTCTCTCT CTCTTTCTCC AATCATATGA ACAAAATAAT CGGCTTCAAG AATTAGGGTT TTGATCAGTC ACAAAAACGT ATCTCTCTCC GTATGCAAGA AGCGGCGCTA GGTATGATCG GAGCCACCGT AGGCGGAGAC GGAGACGCCC CGGCGGTGGC GGAGCAGAAT AGACAGATGA AAGGTGAGAT AGCGACACAT CCGATGTATG AGCAGTTATT GGCCGCACAC GTGGCGTGTC TAAGAGTAGC TACTCCGATA GATCAACTTC CGATCATTGA AGCTCAGCTT TCTCAATCTC ATCATCTTCT TCGTTCTTAC GCTTCCACCG CCGTTGGATA CTCCCACCAT GATCGCGAGC TCGATAATTT CTTGGCACAA TATATAATGG TGTTGTGTAG CTTCAAAGAA CAGCTGCAAC AGCACGTGAG GGTTCATGCC GTCGAAGCTG TTATGGCTTG CCGTGAAATT GAGAACAATC TTCATTCTCT TACAGGAGCA ACGTTAGGAG AAGGGTCAGG TGCGACTATG TCGGAGGATG AGGATGATAT TCAGATGGAC TTCTCGTCTG ATAATTCCGG CGTTGATTTT AGCGGCGGCC ACGATATGAC GGGATTTGGA CCGTTGCTAC CGACTGAATC GGAAAGATCT CTTATGGAAA GAGTCAGACA AGAACTTAAA CTCGAACTCA AACAGGGTTT TAAATCAAGA ATTGAAGATG TAAGAGAAGA GATAATGAGG AAAAGAAGGG CTGGGAAATT GCCAGGAGAC ACAACTACTG TCTTGAAAAA TTGGTGGCAA CAACATTGCA AGTGGCCTTA CCCTACTGAA GATGACAAGG CAAAATTGGT GGAGGAGACA GGATTGCAGT TGAAGCAAAT CAACAATTGG TTCATTAACC AACGCAAGAG GAATTGGCAC AACAACTCTC ACTCGCTCAC TTCCTTGAAG TCCAAGCGCA AACACTAATC TCTTCTTACT ATATTTCATA CTAATTACAT CGCTTAAATC ATGCATGATA TATATGTAAT TCATGTTGTT GATAAAAACG AGGTGTGATC ATTAATATCT TGTACTACTT ACTTAGCTTA TATATGATTT GTGCTTTGAG TGATTACTGT TTATTACTAG ATTGTAATTC ATTTTTTTGT TTTTTATTGT GCATTCAAAT ATATTTTTTT GGTACGAATT GAACACCCTA ATTTTGTAAC GTGTTTTCCG TGGTTGACTA GACCATCATT TGGAAATATA TAAGTAATGA TGCCGACAAA AAA 
Length1273
Protein Sequence
Protein Residue
Map Locationscaffold_2: 1211647.. 1214787
Download Sequence
A.thaliana
AGI-codeAT1G62990.1
DescriptionKNOTTED-like homeobox of Arabidopsis thaliana 7
TAIR curator summaryEncodes a homeodomain transcription factor of the Knotted family. May be involved in secondary cell wall biosynthesis. Mutants have moderately irregular xylem development. Expression of this gene is upregulated by SND1 and MYB46.
Alias[IXR11][KNAT7][KNOTTED-like homeobox of Arabidopsis thaliana 7]
Gene coexpression
MR
MR Locus Description
18.9209 Ahg928536 PYRIMIDINE 4
23.4734 Ahg932721
28.0179 Ahg924675 hAT dimerisation domain-containing protein / transposase-related
37.8946 Ahg489303 YELLOW STRIPE like 2
39.3827 Ahg928996 Homeodomain-like superfamily protein
40.2865 Ahg344726
46.1736 Ahg944000 alpha/beta-Hydrolases superfamily protein
56.4447 Ahg328437 Protein phosphatase 2C family protein
60.3987 Ahg492103 Protein of unknown function, DUF584
63.6082 Ahg899427 Glucose-1-phosphate adenylyltransferase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression