| Annotation |
|---|
| Description | jgi|Araly1|475298|fgenesh2_kg.2__428__AT1G60220.1 |
| Sequence |
ATGACGAAGA GGAAGAAGGA AGTTGTAGAT GTCGATTGTT CCGAGAAGAA AGATTTTGTG ATTGATTGGT CTTCAGCCAT GGATAAGGAA GAAGAAGTTC CCGAGCTGGA GATTGTTAAT ACCACCAAAC CTCCGCCGCC GCAAACGCCA ACGTTTCTCT CCGACGATCA GACGGATTCT CAGATATCTC TAACCGATCG TGCCCTTGAC GAGCAGCTGG AGCGTAGCAA AACGAATCTT GTGACATTAG GTCCGGGTTT ACCCGACAAG GGTGAGAGAA TCCGACTCAG AATCGTCTAC CTTGAAGAAG AGAAGCAGCG TAGGGTTTTA GACCGCTCGA AAATGGAGGT GGACAGAAGT TCGAAGGTCA TGTCTTCGAC GAGCTCAGGT TCAGATGTCT TAACACAAGG GAAAGCAGCC TCAAAAGACC CTTCTAGGCA AGGGAAGACA GACTCAAAAG ACACCTCTAA GCAAGGGAAT GCAGCCTCGA AAGACACCTC TAGACAAGGG AATACAGACT CAAAAGAAGT CTCACGGTCA ACATTTTCTG CCTTTTTCAG TAAACCAAAA ACAGATACTC AGTCAAAGAA AGCATTTGGT AAAGAACTAG AAGATTTGGG ATGTGAAAGT AAGAAACACA AGGCTGATAG AAAGCCCGTA ACAAGGCTGA GCAGCGGGTG GCGGTTGTTG TCAGATATAG GGAACGCTGA GCACAGTGAA AAGCAGTTTG ATTCTGGATT TAAAGGGTCA AATGGGAATC AGAAATCCAA GGAATCTTAT GGAAAGAAAA AGCGCAAGGA AACTTCGATC TATTCTCTGC TTGATGATGA TGATGATGAT GACAACGACC CCATTGGTCA TGAAACTCCT AGGGAGTGGT CGTGGCAAGA ATCTCCATCA GAAAGTTCAA AGCGCCGTAA GAAATCAGAG GATACAGTGA TAAATGTGGA TGAAGAAGAA CCTCAGCCTT CAACAGTGGC GGAGCAAGCG GTTGAACTGC CTGAAGGCTT ACAGGAAGAT ATATGCTACC CATCAAGGGA TGATCCTCAC TTTGTTCAAG TTTGTCTTAA AGATCTTGAA TGCCTTGCGC CTCGAGAATT TCTAACATCA CCGGTTATGA ATTTCTACAT CAGGTTCTTG CAGCAGCAGA TATCATCATC GAATCAAATC TCTGCTGATT GTCATTTCTT CAATACATAT TTCTACAAGA AGCTCAGTGA CGCTGTTACG TACAAGGGGA ATGACAAGGA TGCCTTTTTT GTGAAGTTCA GGCGGTGGTG GAAGGGTATT GATCTATTTC GTAAAGCTTA TATTTTCATA CCAATACATG AAGATCTTCA TTGGAGCCTT GTGATAGTTT GCATCCCTGA TAAGAAAGAT GAATCGGGGT TGACTATACT TCACCTTGAT TCTTTAGGAC TTCACTCGAG AAAATCAATT GTTGAAAACG TAAAAAGGTT TCTGAAAGAC GAATGGAATT ATTTGAATCA AGATGATTAT TCCTTGGATC TACCTATCTC AGAAAAAGTA TGGAAAAACC TCCCTCGTAG GATCAGCGAA GCTGATATAC AGGTTCCGCA GCAGAAAAAC GATTTTGATT GTGGTCCGTT TGTGCTCTTC TTCATTCAAC GGTTCATCGA AGAGGCACCT CAAAGGTTGA AAAGGAAAGA TCTGAGAATG TTCGACAAGA AGTGGTTTAG ACCCGATGAA GCTTCTGCTC TGAGAATCAA AATCCGAAAC ACACTCATCG AGCTATTCCG TGTCAGTGAC CAGACAGACT AAACCAGTAC AGATTATGCA TCATCCAAAT CAAGACATTG CTCACCGCTC TAACAGAGTT CAAGTTTTTG TTCTTGTATA GACTTTAAAG GCAGAAGTAA TATTTGGGCC AAAAGTTAAA TTAAAAAATG GGTACATACT CCATAGGTTG ATGTTGTAAT CCAAAAAAAA AAATTTCACA AAATTTCATT GTTAAAGAAC CTCAGAAGAA GCATAAAAAA TCGCATCTAA TCAGAGTTAC GTT |
| Length | 2023 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 2998598.. 3002615 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G60220.1 |
| Description | UB-like protease 1D |
| TAIR curator summary | Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity: it can cleave C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. sGFP:OTS1 protein accumulates in the nucleus. Double mutant analysis with ULP1C/OTS2 indicates that these genes are involved in salt stress responses and flowering time regulation. Over-expression of 35S:OTS1 increases salt tolerance and reduces the level of SUMO-conjugated proteins. OTS1 transcript levels do not appear to change in response to salt, but, salt stress reduces the level of OTS1 protein in a proteasome-dependent manner. |
| Alias | [OTS1][ULP1D][OVERLY TOLERANT TO SALT 1][UB-like protease 1D] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 22.2036 |
Ahg940935 | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| 24.4949 |
Ahg487916 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| 25.6515 |
Ahg939534 | |
| 35.2136 |
Ahg339050 | RING/FYVE/PHD zinc finger superfamily protein |
| 38.5746 |
Ahg476003 | nudix hydrolase 1 |
| 48.9898 |
Ahg485090 | RING/U-box superfamily protein |
| 49.3964 |
Ahg493617 | DENN (AEX-3) domain-containing protein |
| 50.7937 |
Ahg934838 | Integrase-type DNA-binding superfamily protein |
| 54.9636 |
Ahg893775 | protein serine/threonine kinases;protein tyrosine kinases;ATP binding;protein kinases |
| 57.2713 |
Ahg936001 | nucleic acid binding;RNA binding |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|