Detail



ID : Ahg475327

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|475327|fgenesh2_kg.2__457__AT1G59830.1
Sequence
AAAATAATAA ATATCCATTT TTGTGTGATG AGAGAAACCA AACCAAAGAC GGGCCAGAGC CACCTCTAAA ACAATCGGCG ACTTCTCCTC CTCCTCCACC GTCGCCGCCG TGTTCGATTT ACAACGATTC GGTGGCTAAT CGTTAGATTT TGAATTAAAG GTTAAAGGAG ACGACGACGA GAGATGCCGT CAAACGGAGA TCTCGACCGT CAGATCGAAC AGCTTATGGA GTGTAAACCG TTGGGTGAAG CAGACGTGAA GATCCTCTGC GATCAAGCCA AAGCGATTCT CGTTGAGGAA TATAATGTTC AACCGGTTAA GTGTCCGGTT ACGGTATGCG GCGATATCCA TGGACAGTTT TATGACCTAA TTGAGCTTTT TCGTATTGGT GGTAATGCTC CTGATACTAA TTACCTCTTC ATGGGTGATT ATGTAGATCG TGGCTACTAT TCTGTAGAAA CAGTCTCTTT ATTGGTGGCA CTGAAGGTGC GTTACAGGGA CAGACTTACG ATCCTGCGAG GGAATCATGA GAGTCGTCAG ATTACACAAG TCTATGGTTT TTATGACGAA TGCTTGAGGA AATACGGAAA TGCAAATGTG TGGAAGTATT TTACGGACCT TTTCGATTAT CTTCCTCTTA CAGCACTCAT AGAGAGTCAG GTTTTCTGTT TGCATGGAGG CCTTTCACCT TCTCTGGATA CCCTTGACAA TATCCGAAGC TTGGATCGAA TACAAGAGGT TCCACACGAA GGACCAATGT GCGATCTACT CTGGTCTGAT CCAGATGATC GTTGTGGATG GGGAATATCT CCCCGTGGTG CTGGTTACAC GTTTGGACAG GACATTGCTA CTCAGTTTAA TCATAACAAT GGACTGAGTC TGATATCAAG AGCGCATCAA CTTGTAATGG AAGGCTATAA TTGGTGTCAG GAAAAGAACG TAGTGACAGT GTTTAGTGCA CCAAACTACT GTTACAGATG TGGAAACATG GCAGCAATTC TTGAGATTGG AGAAAAGATG GAACAGAACT TCCTTCAGTT CGATCCAGCA CCTAGACAGG TCGAACCCGA TACCACCCGC AAGACCCCTG ATTATTTTTT GTGATTTCCC TACCACTTCA TTTTTTTTTC AAAGTTTGTT TGTTGCTGTA TCATTGTAGA TGTGTCTCTA TTTTATTTTG TTTTATGGAA TTTGATACCG AAGACGAAAA ACCCATCATT TTTTTGTTGA TGTTGATACT GAAAAAGGTT TGTAGAAGCC TCCTATTATA ATAGAAAATA GCTTTTGAT 
Length1289
Protein Sequence
Protein Residue
Map Locationscaffold_2: 3268954.. 3271499
Download Sequence
A.thaliana
AGI-codeAT1G59830.1
Descriptionprotein phosphatase 2A-2
TAIR curator summaryEncodes one of the isoforms of the catalytic subunit of protein phosphatase 2A: AT1G59830/PP2A-1, AT1G10430/PP2A-2, At2g42500/PP2A-3, At3g58500/PP2A-4 [Plant Molecular Biology (1993) 21:475-485 and (1994) 26:523-528; Note that in more recent publications, there is mixed use of gene names for PP2A-3 and PP2A-4 - some refer to At2g42500 as PP2A-3 and some as PP2A-4].
Alias[PP2A-1][protein phosphatase 2A-1]
Gene coexpression
MR
MR Locus Description
4 Ahg939036 squamosa promoter-binding protein-like 12
14.6969 Ahg914631 indeterminate(ID)-domain 7
18.4391 Ahg938377 general control non-repressible 4
25.2587 Ahg488386 U-box domain-containing protein
32.7261 Ahg486989 Tetratricopeptide repeat (TPR)-like superfamily protein
36.4143 Ahg476943 Protein of unknown function (DUF1644)
37.3095 Ahg477583 LUC7 related protein
38.1051 Ahg492572 pyrimidin 4
39.4968 Ahg945854 Actin-like ATPase superfamily protein
49.0204 Ahg331248 Tetratricopeptide repeat (TPR)-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression