Detail


ID : Ahg475423

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|475423|fgenesh2_kg.2__553__AT1G58122.1
Sequence
ATTGCGAGAA ACAAAGAAAG CTTAACCCTC AAGAAATCAA ACCCACAAAA AAATCAAATT CAATAAAACC TCTTTCTGCT CTTCCTCTCT TTTTCATTCC CATATGTTGC TTCCTTGAAT TCATCTCTTC TCTTCCGAAA GAATGGGGAG CAACATCTGA GGATCCATTT GATTACCATA CATAACTTAT ATTCAAAACA AAAACATATC TTTGTGTGTG CGCGTTAATG ATGAAATAGC AGATTGAGAG CAAGAAAGAG GTAATAGCTG ATAACCGCAA TGGAGATTCA GAGGATGAGG CAGTTGATGT CTCTTTGGTC TAATTTGAAG AGTAGCCGCG TTTCTCTCAC CGGTGGGAAT CATACAGCCG CAAGGTTCTG CACTCGCTAG GCTCGCCTCT TCTCTCGCTC GCTTTTTTCT TTCTTCTTTC TCTTCTTCTT ACTTCCTTTT GATTCTCTTT TAGCTCTCTA TTCTATTCTC TTCTCTTCTC TCTTTCCTTT TCTTTAACTT TCAACTGTAC ATTTTCGCGC GCTCTCTTTG TCTCAGCTTT TAAGACATAA CAAAAAGATA TGGTGTTTGT TACTGTCCAA GACTTTCACT CCATGTGCCA AAAGCATTTT CACTACCTCT TGAAAAAGAG AGACTGCCCG AGCTCCTCTA TAAGCTCTGC GGATACTTTC CTCAAGGCTT CTCGCTCTGA AGTCTTGAGT CTCTTTATGA GATCAACGCT TTTGGCTTTG TTGTTTCTGT CATTTACTTG GTTAAGTCTC CTCAAATATG GAACTTCTGC AACCGCTCCA TCTAAGTCGG TTGAATCTGA CCTTCCTGAA TTACTGCCTT TGCTTCTCAA CGATTTGGAG AAGGAAGGTC TCTTTAAGAT GGGAGATAAA GCACTCTTCC TAAGTGGAGG AGATGATGAG GTCACTGTTT CTTCATACTC TCAAACAGTG ATCGAAACTG ATATGGTTCT TGTATCTGCA AGCAATCAGG AGATGCAGAG CATGGTCCCA GATGAGACCT TTGATTTCGC CTTTGCGCAT TCTCGTCACA TTGACTCTGC TGAATTTATA GACAGGACTC TTAAAGTTGG CGGCATCTTT ACCGTCCAAC TCAACCTTCA AGATCTTCCT CCAAATTTCT TGAAACATCC AAACTACGAA ATAGTCTACG TAAAGAGCTC TGAGTACACG GTAATGACGA TGAGGAAAAC AGGGGAAACA GAGCATAAAC AGAGCTTAGT CGCCCCCGGG AGAAAGCTTC TCGGTATCAC AGAAGAAGAG GCCAGGGAAA AAGCTTTGAG AAAGCTAGAG GATGTTCTCC TTGAACCACC AAGAGCAGCT TCAAGGAAAT CAAGAACTTA CTTCAAACGG ACACGGTACC TCCCGGACCT TATGGGAGAC AATTTGGACC TCGAGAGCTA CTCAAGGCGG GTATTTATCG ATGTGGGAAA CGGAAAAGGA AGCAGCGGAA TGGAATGGTT TGTTGAAAAT TACCCAACAA GGAATCAGAA GTTTGAGATG TACAAGATTG AGACGGTGAA CGATGAGATG AGCCTAGAAT CTGAGAAAAT GGGCATGACG GAGTGGCTGA AAGAGAATGT CAAGGAGGAG GAATACGTGG TGATGAAGGC GGAGGCGGAA GTGGTGGAGG AGATGATGAG GAGCAAGTCG ATAAAAATGG TGGATGAGCT TTTCTTGGAG TGCAAGCCAA AGGGTTTAGG GCTAAGAGGA AGGAAGATGC AGAGTAAGAG TGGTAGGGCT TATTGGGAGT GTTTGGCTCT TTATGGCAAA CTAAGAGATG AAGGTGTTGC TGTGCATCAA TGGTGGGGTT GAAGTTAAAG AACATGGAGA CAGAACTGAG AAGAATATTC ATCAAATCAG TCTCTTTTTA TTCTATTTTA TGATTTTTTT CCCTCTGTTG TCTCTTTTTT GTTTTTGTGT GTTAATTTGT AATCATCAAT ATGTTGTTGT GTTTTATGTA TTTTGTGGTG TTTAAGTTTG GGATCTGATG AGCTTAATTA CATATCTTTC GTGTTTTCTT GTTG
Length2044
Protein Sequence
Protein Residue
Map Locationscaffold_2: 4052303.. 4054346
Download Sequence
A.thaliana
AGI-codeAT1G58122.1
Descriptionconserved peptide upstream open reading frame 45
TAIR curator summaryUpstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF45 represents a conserved upstream opening reading frame relative to major ORF AT1G58120.1
Alias[CPuORF45][conserved peptide upstream open reading frame 45]
Gene coexpression
MR
MR Locus Description
6.40312 Ahg921560 FBD, F-box and Leucine Rich Repeat domains containing protein
6.9282 Ahg494865 Pectin lyase-like superfamily protein
12.1244 Ahg936611 P-glycoprotein 17
17.8885 Ahg316947 Pectin lyase-like superfamily protein
17.9444 Ahg947946
18 Ahg479634 F-box and associated interaction domains-containing protein
18.1659 Ahg477013 Terpenoid cyclases family protein
18.2483 Ahg351609 Protein of Unknown Function (DUF239)
20.8567 Ahg917747 ferric reductase-like transmembrane component family protein
20.8806 Ahg921700 ENTH/VHS/GAT family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression