Detail



ID : Ahg475683

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|475683|fgenesh2_kg.2__813__AT5G56090.1
Sequence
TTTCCTTTCT TTGCAGAAAC CTTGCTTAAA CCCTAGAGAG ATAGACATGT TTCGAGCAGT GGGATCGGCT TTGAAGAGGA ACAAAGAAGC GTTTAATGGA ATCGCTCGAG GATTCACCAC TTCGTCTCAT CAAGCTTTCA CTTCTAACAT TACAGCTGCT ACTGTAACCT CTGCTTCGTC TTCTTCTCTA GCTGGAAACT CCTTCTATGG CTTGCCATCT CTTCTCAAGG GTCAAAATGC TTCAATGTTT AGAAAGATGT CAACTGTAGC GTCGATTAGC TCAGAGAGTA AAGAGGGTTT GAAGCATCTT GTCACTGGAG GACCTCAAGC TCGTAAATGG GTTGGCATAT GGCTTTTTGG TTCTGCTACT TGGGTTTTCA GCATGGTTGT TCTAGGCGGA GTTACTCGAT TAACTCGATC TGGTTTATCC ATGACTGATT GGAAATTTAC TGGTGAATTC CCTCCGCTGT CAGATGAAGC ATGGGTTTGC GAGTTTGAGA AATATATGCA GTCTCCTGAA TATAAGCGTG TGAACAAAGG GATGAATCTT GAAGATTTTA AGTTTATATA TTGGATGGAG TATGCTCATC GAATGTGGGG AAGAGGATTG GGAATCATGT TTGCTTTGCC GTTTTCCTAT TTTCTGCGGA AAGGGTATAT TACTCTACGT CTTGGAGTTC AGCTCTCTGG TTTATTTGCA CTTGGTGCTG GACAAGGTCT CATTGGTTGG TGGATGGTTA AAAGTGGTTT AGAGGAGCCG CCATCTGAAT ATTCTCAACC GAGGGTAAGC CCGTACCGTC TTGCAGCTCA TCTGACCTCA GCTTTTGCCA TTTATTGTGG ACTTTTCTGG ACCGCTCTCT CTGTTGTTAT GCCTGAACCA CCAGCTGAGT CATTGGCTTG GGTTAGGGGA GCCGCTAAAG TGAAGAAGCT TGCATTACCA GTAAGCTTGA TTGTTGGTAT CACTGCAATT TCAGGAGCCT TTGTTGCTGG AAATGATGCT GGTCGTGCAT TCAACACATT CCCGAAAATG GGCGATACAT GGATCCCAGA TAATATATTT GAGATGAAAC CACTTTTACG CAACTTTTTC GAGAACACAG CAACTGTTCA GCTTGATCAT CGCCTTCTTG CAACCACAAC CCTAATTGCA ATTGGAACAA TGTGGTGGTT CACAAGGAAG CTAGACATAC ATCCAGCCGT TAAAGCTTTG ATCGGAAGTA CCGTCGGAAT GACTGCTGTT CAGGTGACAT TAGGTGTATC AACGCTTCTG AGTTATGTTC CGGTCTCACT AGGAAGCGCA CACCAAGCAG GAGCTTTAAC ACTTCTCACT TTGATGCTAC TTCTCAATCA CACTCTTCGG AGGCCATCAC CTTCTCTTCT CAAGTCTCTT CCACAAGTTG CTAAATCAAA TTTTAGCTAA GCCCTCTTTA CTAAAATCTT CCGTTTTTCA TTATTTACTA AAGAAACTAT TCTTTGGCTC GCTATTATAC TAGCAAGCTT TCATCGAGTC CTGCGTCAAT GATGTTGTAT TATCAGTCAT GACTCGAAAA ATAAAGTACG AAAACAATTA ACAAAAGTTT CATATGAATC CTAGAAC 
Length1597
Protein Sequence
Protein Residue
Map Locationscaffold_2: 9494870.. 9497051
Download Sequence
A.thaliana
AGI-codeAT5G56090.1
Descriptioncytochrome c oxidase 15
TAIR curator summaryEncodes a homolog of COX15. Microarray analysis show a 3.2 fold increase in transcription after treatment with rotenone, an electron transport chain inhibitor.
Alias[COX15][cytochrome c oxidase 15]
Gene coexpression
MR
MR Locus Description
39.6989 Ahg481296 DNA repair ATPase-related
62.2736 Ahg332000 U-box domain-containing protein kinase family protein
63.4823 Ahg490589 Transmembrane amino acid transporter family protein
75.4387 Ahg935061 phospholipase D beta 1
81.1665 Ahg482201 LEUNIG_homolog
88.5889 Ahg486152 Glutaredoxin family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression