| Annotation |
|---|
| Description | jgi|Araly1|475977|fgenesh2_kg.2__1107__AT1G68550.2 |
| Sequence |
GGTTCTGGGT TTTAGCTGTT TGGGTTTTAT TTGGTTTCGT TTCTCACTGT TTGTTTTGTC TTTTCGAAGA ACAGGAACAG TGTGTGAAAA GGTTCGGTTT TTAGGGTTTT CGATCTGAAA TATCAACAAG AAAAAAGGCG TTTGATTTAT GTCGGCTGGG TTTGAATCGA CTGTGATTTT GTCTTTGATT CATATCTCTT CTCCGATTTC ATCATCATCG TCTTCTTTGA AATCTGGTCT TCTCAACGCT CTTCACTTCT GCTTTATTAA GCAGAGGCTT GTTCTTGAGA CTCCTTCTCT TTCCATGCGC TTAAGACCCA AAAGGACTTG TTCTAGTGTT GAAGTCTTTG GGGGTTTTCA CATAAAGCAG CAAAAATTTT CTTTTTTCAT AGTTCGCTGA GAGTTTTGAG TTCTTGGTAC AAAAAAGTTT TGACCTTTGA GAGTGATTTT TATGGTTGAG GTTAGAAAAG AACAGTCTTT GAGTGGTACT AGTAGCGAGA TTAAGAAGAG AGCTAAGAGA AACACTGTAT CATCGTCCCT TCCTCAAGAA ACCCAACCTT TGAGAAAAGT CCGTATTATT GTGAATGATC CTTATGCTAC TGATGATTCC TCTAGTGATG AGGAAGAGCT TAAGGTTTCT AAGGTTCGGA GAATGAAACG TATCGTTCGT GAGATTAACT TTCAATCTAT GGAAGTTTCA GAGCAGCCTT CTGAGAGTTC TTCTCAGGAC AGTACTAAAA CTGTTAGTAA GAAAGCTGTG TCTGCTTCTC CTGCTTGTCC TGGGTTGTTG ACTAAGAAGC CTGTTGGTGT TAGGCAAAGG AAATGGGGGA AATGGGCTGC TGAGATTAGA CATCCTATTA AGAAAACTAG GACTTGGTTG GGTACTTTTG ATACTCTTGA AGAAGCTGCT AAAGCTTATG ATGCTAAGAA GATTGAGTTT GATGCACTTG TTGCTTCTCT CTCTGTTTCT GGAAATGTGT CGACTAAAAC TGTTGTTTCT TCATCTGAGA CTAGTCAATG CTCTCGTTCT TCACCTGTTG TTCCTGTTGA GCAAGATGAC ACTTCAGCTT CAGCTCTCAC TTGTGTCAAC CCTGATGATG TCTCTGTTGC TCCGACTCCA AATGCTCCTG CTGGTGGAAA CAAGGAAGTG TTGTTCGATT TCGACTTTAC TGATCTACAA ATCCCTGATC TTGGTTTCTT TGCAGAGGAG CAACATGATC TAGACTTCGA TTGTTTCCTC TCGGATGATC AGTTTGATGA TTTCGGTTTG CTTGATGACA TTCAAGGATT CGAAGACAAT GGTCCAAGCG AATTACCGGA TTTCGACTTT GCGGATGTTG AAGAGCTCCA ACTAGCTGAC TCTAGTTTCG GTTTCCTTGA TCAACTTGCC CCTCTCAACA TCTCTTGCCC ATTAAAAAGT TTTGCAGCTT CATAGGATTT TCCTTAATGT TTAAGTGAGA AGAGTGTTTT TTTACTTCGT TTATGTTATA GTGTATTCAA GACATACAAA ACTGTGTGTT CCGGAGTAGC AAGTTCTTAA GACATAAAGC CGGGTTTTGC AATTAGGAGT TGAGTTTTTA TCAAGTTTTA ATTTATATTG AATGATGTTT TGCTGAGTCT GGTTTCTTTT AACTTTGGGT TTTTTTCTTT GTGCTTTAAG AGCCGTCCAA AGTGAAAGAG GTCAGTTGTA TTACATCATT CTCCACTTTC ATTTTTTGTT AATGTTAAAA CAAAATATTA ATGGAAGAAG TTTTTTAATT T |
| Length | 1761 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 12417278.. 12419208 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G68552.1 |
| Description | conserved peptide upstream open reading frame 53 |
| TAIR curator summary | Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF53 represents a conserved upstream opening reading frame relative to major ORF AT1G68550.1 |
| Alias | [CPuORF53][conserved peptide upstream open reading frame 53] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 12.7279 |
Ahg479780 | rRNA processing protein-related |
| 16.5227 |
Ahg328625 | WRKY DNA-binding protein 32 |
| 17.72 |
Ahg486159 | homologue of NAP57 |
| 19.1311 |
Ahg495674 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| 19.3391 |
Ahg471138 | glutamine-rich protein 23 |
| 23.9165 |
Ahg921381 | MAK16 protein-related |
| 24.7386 |
Ahg495573 | DEA(D/H)-box RNA helicase family protein |
| 28.4956 |
Ahg931973 | Secretory carrier membrane protein (SCAMP) family protein |
| 28.6182 |
Ahg479219 | Nucleotide-sugar transporter family protein |
| 31.9844 |
Ahg914558 | hydroxyproline-rich glycoprotein family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|