Detail



ID : Ahg476042

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|476042|fgenesh2_kg.2__1172__AT1G69180.1
Sequence
ATAAATACAA GCCTTCTAAC TCATAAAATA ACCATAACCC TAACTCTACA AAGTTCTTCT GATTCTTTAT CTCTCTCTTT CTTTCAAGAG CGGTTTTCAA TCCATTCGCT AAAGATCATG AACCTTGAAG AGAAACCAAC CATGGCAGCT TCAAGGGCTT CCCCTCAAAC CGAACATCTC TACTACGTCC GGTGTAGCAT CTGCAACACC ATCCTCGCGG TTGGGATACC ATTGAAGAGA ATGCTTGACA CTGTGACAGT GAAATGCGGA CATTGCGGTA ACCTCTCGTT TCTGACCACA ACTCCTCCTC TCCAAGGCCA TGTCAGCCTC ACCCTTCAGA TGCAGAGCTT TGGTGGGAGT GAGTATAAGA AGGGAAGCTC TTCTTCTTCC TCTTCCTCTA CCTCCAGCGA CCAGCCACCA TCCCCCACAC CACCCTTTGT CGTTAAACCT CCTGAGAAGA AGCAGAGACT TCCATCTGCA TACAACCGCT TCATGAGGGA TGAGATCCAA CGAATCAAAA GTGCTAATCC GGAAATACCA CACCGTGAAG CTTTCAGTGC TGCTGCCAAA AATTGGGCTA AGTACATACC CAACTCTCCT ACTTCCATTA CTTCCGGAGG CCACAACATG ATCCATGGCT TGGGGTTCGG TGAGAAGAAG TGAAAAAAAA AATCTCAGGG GAAAAGAAGC CAAAAATAAC AAACGCATGC ACGTGTGCGA GTGGCTGCGT CGTTTTTCTC ATCTTGTGTT GTTCATGTAA TTTTCCTTAT GTATGTCATG TTGCAGAAAA TGATGTTGCC TTAGTTTCTA TGACTTTATA TTTCTGTCTG TCTTTAGATT TGAAAGTAAC GTCACTTGCT ATGTCCCTTT GGACGTTTAT GTCTGGTCTT TATTTGTCTT AATCCTATCA AAAATTTATC TGCTTATTCC T 
Length931
Protein Sequence
Protein Residue
Map Locationscaffold_2: 12822618.. 12824190
Download Sequence
A.thaliana
AGI-codeAT1G69180.1
DescriptionPlant-specific transcription factor YABBY family protein
TAIR curator summaryPutative transcription factor with zinc finger and helix-loop-helix domains, the later similar to HMG boxes. Involved in specifying abaxial cell fate in the carpel. Four putative LFY binding sites (CCANTG) and two potential binding sites for MADS box proteins known as CArG boxes (CC(A/T)6GG) were found in the region spanning 3.8 Kb upstream of the CRC coding region.
Alias[CRC][CRABS CLAW]
Gene coexpression
MR
MR Locus Description
3.31662 Ahg318113
10.9545 Ahg359707 F-box and associated interaction domains-containing protein
14.2127 Ahg330516
14.2829 Ahg929535
14.6969 Ahg925331
18.3303 Ahg943378
18.6548 Ahg933858 RALF-like 16
19.4936 Ahg907951
20.0749 Virus2978
21.166 Ahg311447 NAC domain containing protein 6
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression