Detail



ID : Ahg476175

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|476175|fgenesh2_kg.2__1305__AT1G70510.1
Sequence
ATGGATAGAA TGTGTGGTTT TCGTTCGACA GAAGAGTATT CGGAGCAAGC AACGCTGATG ATGCCGTCCG ATTATCAATC GCTGATTTGT TCATCCACCG GAGACAATCG CGTGTTTGGA TCCGACGAAC TCGCTACGGC TTTATCGTCA GAAGCGCCTC CACGTATTCG AAAAGCTGAT GATAATTTCT CTCTTAGTGT CATCAAATCC AAAATCGCTT GTCATCCTTT GTATCCTCGC TTGCTCCAAA CCTACATCGA TTGCCAAAAG GTGGGAGCAC CTATGGATAT AGCGTGTATA TTGGAAGAGA TTCAGCAAGA GAACCATGTG TACAAGAGAG ATGTTGCTCC ATTATCTTGC TTTGGAGATG ATCCTGAGCT TGACGAATTC ATGGAAACCT ACTGTGATAT TTTGGTTAAA TACAAAGCCG ATCTTGCGAG GCCGTTCGAC GAGGCTGCAA CTTTCATAAA CAAGATCGAA ATGCAACTTC AGAACCTGTG CACTGGTCCA GCGTCTGCTA CAGCTCTTTC AGATGATGGC GCGGTTTCAT CTGACGAGGA ACTGAGAGAA GATGATCACG TAACAGCGCA GGACAGCCAA CAACGAAGCA ATGACCGGGA TCTGAAGGAC CAGCTACTAC GTAAATTCGG TAGCCATATC AGTTCATTGA AGCTCGAGTT CTCTAAGAAG AAGAAGAAAG GGAAGTTACC AAGAGAAGCA AGACAAGCGT TGTTCGATTG GTGGAATGTT CATTATAAAT GGCCTTACCC CACTGAAGGT GACAAAATAG CTCTGGCTGG AGAAACAGGA TTGAATCAAA AGCAAATCAA CAATTGGTTT ATAAACCAAA GGAAACGCCA TTGGAAGCCT TCGGAGAACA TGCCGTTCGA TATGATGGAT GATTCTAATG AAACATTCTT AACCGAGGAA TGAAAAGAGA GAGATGAGAT TGTGCATTGT ATAATTTTAC ATAGTTTTCC CGAGAAAAGA AAAGGAGTAA AAAAGCTTTA ACTCGTTAGC CAAAACCGAC GAGGGAGTAA CGACAATAAT ATAATGTCAC TAATCTTCCA A 
Length1071
Protein Sequence
Protein Residue
Map Locationscaffold_2: 13613224.. 13618643
Download Sequence
A.thaliana
AGI-codeAT1G70510.1
DescriptionKNOTTED-like from Arabidopsis thaliana 2
TAIR curator summaryA member of class I knotted1-like homeobox gene family (together with KNAT1). Similar to the knotted1 (kn1) homeobox gene of maize. KNAT2 acts synergistically with cytokinins and antagonistically with ethylene based on ectopic expression studies in different mutant backgrounds and hormone treatments. In addition, KNAT2 is negatively regulated by AS and YABBY genes. KNAT2 is strongly expressed in the shoot apex of seedlings, while in mature plants the gene is primarily expressed in flowers and inflorescence stems.
Alias[ATK1][KNAT2][ARABIDOPSIS THALIANA KN 1][KNOTTED-like from Arabidopsis thaliana 2]
Gene coexpression
MR
MR Locus Description
3.87298 Ahg347293
6.48074 Ahg343150
8.66025 Ahg948810
24.779 Ahg930916
24.98 Ahg470549 chromatin remodeling 31
27.55 Ahg931293
29.1033 Ahg931296
36.9459 Ahg902462 P-loop containing nucleoside triphosphate hydrolases superfamily protein
56.107 Ahg949205 transposable element gene
69.7997 Ahg487079
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression