Detail



ID : Ahg476289

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|476289|fgenesh2_kg.2__1419__AT1G71692.1
Sequence
AGAGATGGCT CGTGGAAAGA TTCAGCTCAA GAGGATTGAG AACCCGGTTC ACAGACAAGT GACTTTTTGC AAGAGGAGAA CTGGTCTTCT CAAGAAGGCT AAGGAGCTCT CTGTGCTCTG TGACGCCGAG ATCGGTGTTG TGATCTTCTC TCCACAGGGC AAGCTCTTTG AGCTCGCTAC TAAAGGAACA ATGGAGGGAA TGATTGATAA GTACATGAAG TGTACTGGTG GTGGTCGTGG TTCTTCTTCT GCTACTTTTA CTGCTCAAGA ACAACTTCAA CCACCAAATC TTAATCCGAA GGATGAGATC AACGTGCTTA AGCAAGAGAT TGAGATGCTT CAGAAAGGGA TAAGCTATAT GTTTGGAGGA GGAGATGGGG CGATGAATCT TGAAGAACTT CTTTTGCTTG AGAAGCATCT TGAGTATTGG ATTTCTCAGA TTCGCTCTGC TAAGATGGAT CTTATGCTTC AAGAAATTCA GTCATTGAGG AACAAGGAAG GAGTCCTCAA AAACACCAAC AAGTATCTCC TCGAAAAGAT AGAGGAAAAC AACAATAGCA TATTAGATGC TAACTTTGCA ACAGTCATGG AGACTAACTA TTCCTATCCG CTAACCATGC CAAGTGAAAT ATTTCAGTTC TAGACCATAG GGTATTTAAA GACTATGTCT CACGAATTTA AATAACCTTG GTAAGTATAA TATAGTGTTG TTAAATCACA CATAATTAAA ATAAAGCCTG TGGAACTTTG CTAGGCAGTT GAAATTCTAT CTGTATGTTT TTTTTCCTCT TGTTTTTCAT TTGTTGGTGT GAACATGAAA TGAGTACAAG TGTGGTGTGT ACTTAAAGCT CTTTCTGGTT TATATCTATG GTTTGAATTT ATGGATTATT TGGTTTT 
Length897
Protein Sequence
Protein Residue
Map Locationscaffold_2: 14094504.. 14097147
Download Sequence
A.thaliana
AGI-codeAT1G71692.1
DescriptionAGAMOUS-like 12
TAIR curator summaryEncodes a member of the MADS box family of transcription factors. Involved in root cell differentiation and flowering time. Loss of function mutations have abnormal cellular differentiation in the roots and are late flowering. AGL12 along with AGL14, and AGL17 is preferentially expressed in root tissues and represent the only characterized MADS box genes expressed in roots.
Alias[AGL12][XAL1][AGAMOUS-like 12][XAANTAL1]
Gene coexpression
MR
MR Locus Description
2.23607 Ahg929561 F-box and associated interaction domains-containing protein
7.93725 Ahg922564
8.24621 Ahg933710 DNA polymerase epsilon subunit B2
10.247 Ahg359032
18.4932 Ahg895912
19.4936 Ahg926203 Eukaryotic aspartyl protease family protein
21.6795 Ahg923031 Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related
22.4499 Ahg345260 Protein of Unknown Function (DUF239)
24.8193 Ahg913400
24.8596 Ahg949132
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression