Detail



ID : Ahg476359

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|476359|fgenesh2_kg.2__1489__AT1G72310.1
Sequence
CTTCTTCTTC TTATGCCTTC AGAGACACAG ATTCATACAA TTCACACCTT TCTTTTTCTA CTTCCTCTTC TCATAAACCC TTTTAACATT TCCCTCTCAG CTCCATCATT ATTACACATC ACTCGGTCTC AATTCCAAGC TCTGTATTCC AATCCTTTGT TGCATTAACT CTCTGGGGTT TTGTTTAGTT TGCTTTTCTT CCATTTGGGT ACCCACCAAA AGAATAAAGT TTCTTGCTTT CCCTCACAAA ACCCTAAATT TCATATCACC ATCCAATTCC ATGTTTTGCT CTGCTCAACT CTCTGTTTCT GCTTCTGAAT CATCGTTTTC CTTCATATAA CCAAGCCAAT TGTGTTGATT CATCTTGGCA CATTCATTGT TTTGAGAAGG AACAGAAAAA GTTCTGATCT TGTCTCCTTC GCACATCAAT GGACGATAAT GGATCTGCTC ATAGCTCAAT GTTCGGTGAT CTATCAACAG AAGAAGTCAC AAGCAAGATC ATTCTCACAG CAATCATTGT TCTATTCATG GCTGTCCTTT TCGTCCTTAT CCTCCATCTT TACGCCAAAC TCTACTGGTG GAGAATAGAT CAGCTCCAAC AACAGCAACA ACAACAGCAA GAGCAAGAAC AAGAAGAAGA CCAATCATCC ATTGCTCCGC CTGTAGTCAC TCGTCGTCAG CGACGCCGTT TCATCTTCGT CCCAGGCCAA GACGCTCTAT CCAACACTGG ACTTACCTCT TTTGAACTCA GTTCCTTACC AATTGTCTTT TTCAGACAAG ATAGTTGCAA AGATGGTTTG GAATGCTCTA TTTGTTTGTC TGAGCTTGTT AAAGGAGATA AAGCAAGGCT GCTTCCAAAG TGTAACCATA GCTTCCATGT TGAGTGTATT GACATGTGGT TTCAGTCTCA CTCTACTTGT CCGATTTGTA GAAACACGGT TCTTGGTCCT GACAAAGCTA GCTCAAAGAG AGTTGAACAA GTTCCAGACA ATGCAGATCA TGCTGGTAGC ACCAATAACA ACCATGATGC TTTGTCACAA ATTTCAACTT CTTCTCCGGA ATTTCCCACC AATGTCTTGG TATGGGGTCG CCAGGATCAG GTTAGTACCG GAAACAACAA TGTCGGGCCT CAAGAAGACA GTGTTGCTGG TAATGGTGCT TCTCAGAGTC AAGAAGCTGT TGTTCTGGAT ATCAATGATT CTTCCATAAC AAGTCAGAAT GTATCATCTT CGTCGTCATC GATGAGGTTT ATTGTTGAGG AGGACGAAGC AAAATCTCCA ATGACAACGA GGTTGAGGTC TTTAAGGAGG TTTTTAAGCA GAGACAAGAG AGTGGCTTGT AGCAGTAGTA GTACTAGTAG TAGTAGTAGC AGCTCCAATG CTGTTGCTTC TGTTGATCCT TGAAGATTGT TATTACTTAT TAGATTAGCT GAGTGAGATT GCCTGAAGAT GTCAAACTGT GTATGTGGTC TCGGCTCTTT ATTGGCTGTG TTTGAGAGCT TTCTTTGTCA TCCAAGCAAA TCATTTATGT ATTCCACGGG TTTTGTTTAC TCAGATC 
Length1557
Protein Sequence
Protein Residue
Map Locationscaffold_2: 14451745.. 14453319
Download Sequence
A.thaliana
AGI-codeAT1G72310.1
DescriptionRING/U-box superfamily protein
TAIR curator summaryEncodes a putative RING-H2 zinc finger protein ATL3 (ATL3).
Alias[ATL3]
Gene coexpression
MR
MR Locus Description
31.8119 Ahg495581 Uncharacterised protein family (UPF0497)
56.8595 Ahg478745 O-Glycosyl hydrolases family 17 protein
84.0238 Ahg940812 IQ-domain 11
95.5615 Ahg920418 FAD/NAD(P)-binding oxidoreductase
96.2497 Ahg921305 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression