Detail



ID : Ahg476540

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|476540|fgenesh2_kg.2__1670__AT1G74000.1
Sequence
GATGGATAAC AAAAACACAA CCAGAGAAAC ATTATGAGGT CGTTTGTCTC CTTGATTTCT TTTCTCCTTC TTCTCTCATT TTCTTCATCT GTTTTCTCAG CCAAAGAGTC ATTTCAAAAG CTTCCGGTGC CAGGAAACAG AACAGGCCCT GAAGCTTTCG CTTTTGATTC CACCGGAAAA GGATTCTACA CTGGAGTCTC CGGCGGTAAA ATCCTAAAAT ATCTTCCAAG GAAAGGTTAT GTCGATTTTG CCCAGATCAC AAACTCTTCG AAGTCTTCTT TGTGCGACGG AGCACTTGGA ACTACTAACG TTGGAAAATG TGGCCGACCG GCGGGAATAG CTTTCAACAG GAAAACAGGT GATCTTTACG TCGCTGATGC TCCTTTGGGT CTCCACGTCG TTTCTCGAGG CGGCGGTTTG GCTAAGAAGA TCGCCGACAG TGTCGACGGC AAGCCCTTCT TGTTTCTCGA CGGTCTCGAC GTTGATCCCA CTACCGGTGT CGTCTATTTC ACTTCCTTCA GCTCAACATT TGGCCCTAGC GATGTTTTGA AAGCAGTGGC AACAAAAGAC TCGACCGGTA AGCTCTTCAA ATACGATCCA TCAAAAAAGG TCGTGACTGT ATTGATGGAA GGTCTAAGTG GCTCAGCCGG ATGTGCCGTT AGCTCAGATG GTTCATTCGT GCTGGTTAGT CAGTTCACAA AGAGTAACAT CAAAAGGTAT TGGATCAAAG GAGCTAAAGC TGGTTCTTTT GAAGACTTCA CCAACTCGGT CTCGAGCCCT GACAACATCA AGAGGATCGG TTCTTCTGGA AACTTTTGGG TTGCTTCGGT CGTGAACTCA GCCACCGGAC CGACAAACCC TTCGGCGGTT AAAGTCAGTT CTGATGGTAA AGTGATTCAG ACCATTCCCC TAAAAGATAA GTTTGGGGAT ACTTTGGTTA GCGAGGTTAA TGAATTCAGA GGACGGCTTT ATATCGGAGC TCTTTTTGGT CCTTTTGCCG GAATTCTTAA GCTTTAAAGT GAAATTGTAT CGAAATAAGG TCTTGACGGA TCCATGTACT ATGTTCATGT TGATTCTGTT CAAATATATA TGATTTT 
Length1097
Protein Sequence
Protein Residue
Map Locationscaffold_2: 15155593.. 15157858
Download Sequence
A.thaliana
AGI-codeAT1G74000.1
Descriptionstrictosidine synthase 3
TAIR curator summaryencodes a protein similar to strictosidine synthase, which is involved in the production of monoterpene indole alkaloids. This gene belongs to a family of 13 members in Arabidopsis.
Alias[SS3][strictosidine synthase 3]
Gene coexpression
MR
MR Locus Description
26.4953 Ahg930168 Domain of unknown function (DUF26)
43.6119 Ahg344438
67.2012 Ahg897183 Polynucleotidyl transferase, ribonuclease H-like superfamily protein
67.3276 Ahg940090 RING/U-box superfamily protein
73.973 Ahg475796
81.2404 Ahg487556 Integrase-type DNA-binding superfamily protein
81.7924 Ahg348300 serine carboxypeptidase-like 37
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression