Detail



ID : Ahg476585

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|476585|fgenesh2_kg.2__1715__AT1G74500.1
Sequence
ATACTATCAA CTCTTCTCTC CCTCTCTCTT CCTTTTCCGG CATAACTTGT GTGTTACCCT AAACTCCATA TCCTGTTTCA TCGATAAATT AAAGTGCCTT TGCTACTAAT ATCTATCACT CTTACTACTT GTCGAATAAT AATTCAACAA AAAAAAAAAA TGTCGGGAAG AAGATCACGT TCGAGGCAAT CATCAGGAAC TTCAAGGATC TCAGAAGATC AAATCAATGA TCTCATTATC AAGTTGCAAC AGCTTCTTCC TGAGCTCAGG GACAGTCGTC GCTCCGACAA GGTTTCAGCA GCGAGGGTGT TACAAGATAC GTGCAACTAC ATAAGGAATC TGCATAGAGA GGTTGATGAT CTAAGTGAGA GGTTATCTGA GTTACTTGCA AACACAGACA CTGCACAAGC TGCTTTAATC AGAAGCTTAC TTACCCAATA ATTCCTATCT TTTTGTTCTT CTTCTTCTTC TTCTTCTTTT TTATTGTTTA CTATAATAAT AATAATAATA GTTTGCGGAT TGATTTTTCT ATAGATGATG ACCTTATAAA CGTTGAATGA TACGAGTTCG TC 
Length572
Protein Sequence
Protein Residue
Map Locationscaffold_2: 15360277.. 15360925
Download Sequence
A.thaliana
AGI-codeAT1G74500.1
Descriptionactivation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1
TAIR curator summaryEncodes a basic helix–loop–helix transcription factor that acts downstream of MP in root initiation. TMO7 protein moves to the hypophysis and to vascular cells, contributing to MP-dependent root formation. Promotes the correct definition of the hypophysis cell division plane.
Alias[ATBS1][bHLH135][BS1][PRE3][TMO7][activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1][basic helix-loop-helix protein 135][PACLOBUTRAZOL RESISTANCE 3][TARGET OF MONOPTEROS 7]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg908543 TRAF-like family protein
2.82843 Ahg487292 Protein of Unknown Function (DUF239)
3.87298 Ahg943361 TRAF-like family protein
3.87298 Ahg937876 TRAF-like family protein
5.65685 Ahg940645
8.12404 Ahg900027
10.247 Ahg943951
13.3041 Ahg896956
16.5831 Ahg939079
17.6635 Ahg944993
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression