| Annotation |
|---|
| Description | jgi|Araly1|476700|fgenesh2_kg.2__1830__AT1G75520.1 |
| Sequence |
AACCGTAGTG AAGTGCCCAA AGCAAAAGAT CTTCATGGGA CTCTCTATGT CTTAAAAACC TTTTTCTCTT TCCCTCTCTC TCTCTTAAAT CCACAGAGTA AATCCAGCAA ACTTCCACTT TCAGAGATCA AAATTGTGTT ACTTAAATGA TGAAGAGAGA CTAATTCCAT GGCGGCGTTT GCAGTTTCTT AAGCTTCCGC ATCATCTACT CTCAATTTCT TATTATAGAA AAGAAAAGGG AATCAAATCA AGATTTTCCC TTTTCTTTGA TATCTCTTTG TAGTGTGTTG TGTGTGTGAT GTTGATTATC ACTGGGGAAA GAAATGGCAG GGTTCTTCTA TCTAGGGGGG AGAGACAACA ACAACAAGCA AAATCATCAT CAAGTAGACA AGGATCATCA TCATCAAGAC AATAGCAATT ATCTTTATCT TTACAAAGAT GAGATCTATA ACAACAACAA GGGTTTCGAG ATTTGGCCTC CACAATACTT CCAACAACAA GAACATCAAC AACAACAACA CCAACAGCGA CAACATGCCT CAGCTCCTGC AAACTTCTAC TCATTTGGAA TGGTTCCAAG CGGAAGCAGC AGCAACAACA ACAATAACCG GAGCAGGAGT TTATACTTCA ACGTAGTCTC CGATCATGAG CCGGGAGGGT TCACGGTGAC GAGACAAGGA GGTATGAATT GTCAAGATTG TGGGAATCAA GCTAAGAAAG ATTGTCCTCA TATGAGATGT AGAACTTGTT GTAAAAGCCG AGGCTTTCAT TGTCAAACTC ACGTTAAGAG CACTTGGGTT CCTGCTGCTA AACGCCGTGA GCGTCTAGCC CAACTCGCTT CCTTGCAGCA CCACTCAGCC TCTAGCCGTG AAACGCAAAA CGCAAAACGC CTTCGTGAAG CTAGTGGTGG TAATAATGAT GATGATAAAG ACCATAGTGG TGGTGCTGGA TCGGCTCTTG CTAATACCCG TGTGGTGAAT GCTAATTCTA ATTCAGGGTT GGAGGTGAGT CAACACTTAC CACCGGAGGT TAACTCACCG GCGGTATTCC GGTGCGTTAA AGTGAGCTCA ATAGAAGAGG ATGAAGATGA TCAAGAATAT GCTTACCAAA CGGCTGTGAA CATTGGAGGA CATGTCTTCA AAGGCATTCT CTATGACCAA GGACCAGATC AAGATCATAA TCATCACCTT AACCTCCTTG CCTCCACTGC AACCACCACC AATGTGGAGG AGACTGCCAC GAAGACGGTC ACCGGTAACA ATAATAATGG ATTAATGCTT GATCCTTCGT CGCTTTACCC GGCTCAACTC AACTCCTTCA TCGCCGGTAC GCCATTCTTC ACACCTCCGA GGTCTTGAGA TTCAGATATC AGTTATTGAT TATGTTAATC TTTAAACGTT ATAATAATGA GAGGCTTTCA TTTTGTTGTT GTTTTTGTAT TCGTCTTTGT GTTTTTGACA TTTCGTGCAA TTTGATAAAA CACCCTTAGC TAGGTTGTTA CTTAGTGGTG ATAAACATGC ATCTTGTACG TAC |
| Length | 1533 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 15780748.. 15782669 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G75520.1 |
| Description | SHI-related sequence 5 |
| TAIR curator summary | A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. |
| Alias | [SRS5][SHI-related sequence 5] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 21.2368 |
Ahg929770 | Protein kinase superfamily protein |
| 30.8869 |
Ahg481495 | acireductone dioxygenase 3 |
| 34.7851 |
Ahg933273 | |
| 36.1248 |
Ahg900378 | |
| 37.8418 |
Ahg316947 | Pectin lyase-like superfamily protein |
| 50.7937 |
Ahg311764 | GDSL-like Lipase/Acylhydrolase superfamily protein |
| 55.0999 |
Ahg917658 | subtilase 4.13 |
| 55.6327 |
Ahg335836 | EF hand calcium-binding protein family |
| 57.1664 |
Ahg945803 | insulin-like growth factor binding |
| 63.4035 |
Ahg949069 | transposable element gene |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|