Detail


ID : Ahg476712

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|476712|fgenesh2_kg.2__1842__AT1G75630.1
Sequence
AATTTGGTAA CAGATCTCAT CGGAGCAACA ATCATCAATG GCTTCTGGTT TCAGCGGCGA TGAAACTGCT CCTTTCTTCG GATTCCTCGG CGCCGCCGCT GCACTCGTTT TCTCCTGTAT GGGAGCAGCG TACGGGACGG CGAAGAGTGG CGTCGGAGTT GCGTCGATGG GAGTGATGAG ACCTGAACTT GTTATGAAAT CGATTGTGCC TGTTGTCATG GCTGGTGTTT TAGGTATTTA TGGTTTGATC ATCGCTGTCA TCATCAGTAC TGGGATTAAC CCCAAGGCCA AGTCTTATTA CCTATTCGAT GGCTATGCTC ATCTCTCTTC TGGGCTAGCT TGTGGTCTCT CTCTGCTGGT ATGGCTATTG GAATCGTCGG TGATGCTGGT GTTAGAAGTT TTTGGTATAG CTTTGGTGTT TGTTGTTTTA CATCATTGGA TAGGAAAGAT GATTAGAGCG AATGCGCAAC AACCGAAGCT GTTTGTGGGA ATGATTCTGA TTCTCATCTT TGCGGAAGCG CTTGCACTAT ATGGTCTCAT TGTTGGTATC ATCCTCTCAT CTCGAGCTGG TCAGTCTAGA GCTGAGTGAA AGAAGTGGTG ACTTATTGTT AGTATCAACA TGTCTCATAT CAGAAGTTTA GCTTCTCCTT TCACTTCTTT TTTTGTGAGT TTGAGTTCTG TTATGATTGG ACACACTTGC ATTGCAAATC CCTCAATTA
Length719
Protein Sequence
Protein Residue
Map Locationscaffold_2: 15841743.. 15843244
Download Sequence
A.thaliana
AGI-codeAT1G75630.2
Descriptionvacuolar H+-pumping ATPase 16 kDa proteolipid subunit 4
TAIR curator summaryvacuolar H+-pumping ATPase 16 kD proteolipid (ava-p) mRNA,
Alias[AVA-P4][vacuolar H+-pumping ATPase 16 kDa proteolipid subunit 4]
Gene coexpression
MR
MR Locus Description
5.09902 Ahg496018 Protein kinase superfamily protein
5.74456 Ahg490482 RNA-binding (RRM/RBD/RNP motifs) family protein
8.94427 Ahg479589 ubiquitin-specific protease 14
9.43398 Ahg495982 RAN binding protein 1
12.6491 Ahg492634 Alkaline phytoceramidase (aPHC)
17.7482 Ahg491582 serine/arginine-rich 22
35.6791 Ahg485973 SC35-like splicing factor 30
36.3318 Ahg950176 RAN GTPase 3
37.6962 Ahg945849 methyl-CPG-binding domain 1
38.6135 Ahg950284 WRKY DNA-binding protein 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression