Detail



ID : Ahg476900

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|476900|fgenesh2_kg.2__2030__AT1G77360.1
Sequence
ATGACGATGA TCAGAATTCT CAATCGTCAA TCCAGATTGT GTTCTAAGAG TTTTCTGTCT GCGAGGCTGT ATAGTTCAAG CGAACAAGTG AGAGATGTTG CAGATGTGGC CAAGAACATA TCTAAAGTAT TGATGTCTTC TCCACAACTG GTGATTGACT CGGCTTTAGA TCAAAGTGGG TTAAGGGTTT CACCAGAAGT TGTAGAAGAT GTTTTATATA GATTCAGGAA TGCTGGTTTG TTGGCATACA GGTTCTTCCA ATGGTCTGAG AAGCAACGTC ATTACGAGCA TAGTGTTCGT GCCTACCACA TGATGATTGA GTCTACGGCA AAGATTAGGC AGTACAAGCT CATGTGGGAT CTCATCAATG CAATGAGGAA GAAGGAGATG CTAAACGTCG AGACTTTTTG TATCGTAATG AGGAAGTACG CCAGGGCGCA GAAAGTGGAT GAGGCGATTT ACGCGTTTAA TGTGATGGAG AAGTATGATT TACCGCCAAA TCTTGTGGCG TTCAACGGGT TGCTGAGTGC GTTGTGTAAA TCCAAGAATG TGAGGAAATC ACAGGAAATT TTCGAGAATA TGAGGGATCG GTTTACGCCT GACTCTAAAA CCTATAGCAT ATTGCTTGAA GGATGGGGGA AAGAACCCAA CTTGCCCAAG GCAAGAGAGG TTTTTCGGGA AATGGTTGAT GCGGGTTCTC TTCCGGATAT AGTGACCTAT AGTATAATGG TTGACATACT TTGTAAAGCT GGAAGAGTTG ATGAAGCTCT TGGCATTGTG AGGAGCATGG ATCCAAGCAT TTGCAAGCCG ACAACTTTTA TCTATAGTGT GCTTGTACAT ACTTATGGAA CTGAGAACCG GCTTGAAGAG GCGGTTGATA CGTTCCTCGA GATGGAAAGA AGTGGAATGA AGGCCGATGT AGCGGTTTTC AATTCATTGA TTGGTGCATT TTGCAAAACA AATAGGATGA AGAATGTGTA TAGGGTTTTG AAAGAAATGA AGAGTAAAGG TGTGACGCCT AACTCCAAGT CATGTAACAT TATTCTACGC CATCTAATAG ATCGAGGGGA GAAAGACGAA GCTTATAATG TCTTTAGGAA GATGATTAAA GTGTGCGAAC CAGATGCAGA CACATACACT ATGATGATAA AGATGTTTTG TGAGAAGAAA GAGATGGAGA CCGCGGATAA AGTGTGGAAG TACATGAGGA AGAAAGGGGT GTTCCCTAGT ATGCACACAT TCTCAGTTCT TATTAATGGG TTGGGCGAGG AGCCTAACAC TCAAAAAGCT TGTGTTTTGT TAGAGGAGAT GATCGAGATG GGGATTCGAC CATCGGGTGC GACATTTGGT AGATTAAGAC AGCTGCTTCT CAAAGAAGAT AGAGAAGATG TGCTTAAGTT TCTTAATGAG AAGATGAACG TTTTGGTCAA TGAGCCTTTG TGTGATTGA 
Length1449
Protein Sequence
Protein Residue
Map Locationscaffold_2: 16609764.. 16611212
Download Sequence
A.thaliana
AGI-codeAT1G77360.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias[APPR6][Arabidopsis pentatricopeptide repeat 6]
Gene coexpression
MR
MR Locus Description
30.6594 Ahg486110 Cam interacting protein 111
53.7401 Ahg474957 sporulation 11-2
65.3452 Ahg485437 Putative methyltransferase family protein
66.3325 Ahg315605
84.7526 Ahg494338 O-acetyltransferase family protein
92.8224 Ahg495147
92.844 Ahg487377 syntaxin of plants 31
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression