Detail



ID : Ahg477027

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477027|fgenesh2_kg.2__2157__AT1G78620.1
Sequence
TCTTCGGAAG GAAGCTAAGT CATGGCAACG ATTTCGTCTA GTCTACTACT CTTAAATTCT TCTAGATCAG TTTCACCTCT GAGATTCCCA AAATTCTCGG GATTTTCTTC TTCTGCTCCA TTCGCTAGAT CTTGCCGATT TGGACGACGT AATCTGGAAC CCCTTTCCAA CGGAATGCTT TCGTCGGGAA GCAGAGCCGA CGGTGCCACG GTGGCGGCTG CATCGATGGA AGGTGTGATG ACGGAGGCGA TGAAGCTGAT TCAATCGGCG TCTCCAACCT GGAAATCAGC CGTGGCTAAC AATTTGTTGA TATTTGTTCT CGGTTCACCG CTTCTTGTTA CTGGATTGTC TGCTTCTGGG ATCGCCGCCG CGTTTTTGCT CGGTACTTTA ACTTGGCGAG CTTATGGCTC TGCTGGTTTC CTCTTAGTCG CTGCTTACTT CGTCATAGGA ACAGCGGCAA CAAAGGTTAA AATGACGCAA AAGGAAGCAC AAGGTGTGGC CGAAAAGAGA AAAGGCAGAA GAGGACCACG CAGTGTGATT GGTTCAAGTG CTGCTGGTTG TGTCTGTGCT TTTCTTTCAA TATATCAAGT GGGAGGAGCA GCTTTTTCCC AGCTTTTCCG GCTTGGTTTT GTTTCCAGTT TCTGCACTAA AGTGTCTGAC ACCGTCTCAA GTGAGATAGG CAAAGCTTAT GGAAAAACAA CGTATTTAGC TACGACATTT AAGATTGTAC CAAGAGGAAC CGAGGGAGCT ATGAGTATTG AAGGAACATT GGCTGGACTT TTAGCATCAT TTTTTCTTGC ATCTGTTGGC TGTTTCCTGG GTCAGATAAC CCCTCCAGAA GCAGCTGTAT GTGTACTAGC TTCCCAGATT GCCAATCTTG GAGAAAGCAT AATAGGTGCT TCTTTTCAAG ACAAAGAAGG ATTCAAATGG CTAAACAATG ATGTAGTCAA CGTGATCAAC ATAAGCTTGG GAAGCATCGT AGCGATTTTG ATGCAACAGT TTATACTCCA GAATTGGGTC AAGTAAAACC TGTCACGAAG GTCATGTCTT CTCAGTGAGG TTAGATTTTT TTTCTTTCTT TTTTCTATTG TTAAACACCT TACGTATTCA GTTGTGTTGT AAATTACACT CTGTTGTGTA CAATTAGTAG TCCAACATCA ATGAGGGGAT ATATAAACTT CTGGAACCCT TGTCTAACAA TTATTGGATG ATATGAATTT GAATTAAGTC CACCTTTGAA ATTGTCCCGT AGATAGAGAG ACTTTTAAAA TCTCATAAAT CTCTTGATCC ATTCACTTGA TCTCTTCCAC TTCCTTCACA TGAAATCCAA ACTCTATTGC GACATCAGAA ATTGAAGAAA CTGTAAAAAA AATACAGGTA GAAAGTAGAG GAAGTAGTGA TGTAAATGTA AGAAAAAGGC AACAACAAAG TATCAAAAAT TGGTTGAGAA AGAAGTAGAA AAAAAGGTCG TGATTTTCTC GAATACATTC TTCCTTTTAT ATTCTCGTCG TTGCGTAAGA TAATGTTTCT GGTGGCCAAT TTTAATTTAG ATGCCTCTAG AGAAATAAAA CTAAGCATCA ATCGGCCTAG CTGTTATACA GCGAGACTTA ACAGGCCTGC TACTTTAAAG ATGAAGAAAA TTTATACAAT GCGTTGCTTT TACGAACCTT TGTGGTCCGC TATACGATAC GACGATGGCC CATGGGCCGC GACATTTGTC TAATACAGCT GACAAGTGAC AACCACACGC GCTCACCGCC GCAAATCTCG CTTTTTCTTT CTAAAGTCAA ATCTCCGCCG CGCCGCGCAT GAAGAAGACT CTTGCTGCGC TTTTTCTTAT TTTTCACTTT CTTGGTTAAA TTTTCTAACA TGGGTTTACT ACTGGCTCCA TAATA 
Length1895
Protein Sequence
Protein Residue
Map Locationscaffold_2: 17261558.. 17264720
Download Sequence
A.thaliana
AGI-codeAT1G78620.2
DescriptionProtein of unknown function DUF92, transmembrane
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
14.1421 Ahg931978 lipoic acid synthase 1
16.3401 Ahg496819 Thioredoxin superfamily protein
19.0263 Ahg474385 Putative thiol-disulphide oxidoreductase DCC
19.6723 Ahg470350 RING 1B
25.0599 Ahg494356 ornithine-delta-aminotransferase
30.249 Ahg926293 nitrate transporter 1:2
39.5474 Ahg481099 DNAJ heat shock family protein
42.8952 Ahg482870 RNA-binding KH domain-containing protein
43.2666 Ahg491869 casein kinase I-like 3
43.4396 Ahg487407 NAD(P)-binding Rossmann-fold superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression