Detail



ID : Ahg477061

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477061|fgenesh2_kg.2__2191__AT1G78930.1
Sequence
GCTACAGATA AACCCTGCAA CAGCTTCTTC TTCTTCCTCT TGATGTGGGT AGAAGCAAAG TATCGACCTT TGTCTTCTTC TCCGTCGTGT TTATGGAGCT TTTACATACC TCCTGCTATT TCGAAACCCT AACCTTGATT TCTCCTCCTC TACAATCTTG TAAATTTGGT TCCAACTCTC TCTTCTTCTC TCCTCGTCGC GTAACCTTGC TCTCGGCTTA CCACCACAGT GGCCGATTCG CTGTTTCTGC CTCGTTTCAG CACGGAGATA CGAATTTGAG CTCTAGTTCT TCGCAGACAA ATCACGAGGA CGCGCAGAAT TCAATTGCTG AGTTTCTCCG ACGAGACATT GGTCTCTCAG AGGCCGATTC AGATTTCATT TCTGAAAATT GTCCAAAGTA CACGAGAATG ATTGTAGAGG GTGTTAGGGA TTTGGAGGAA TGGAATTCGT GGAAAGGGAG TGGAGAATCT GTGGGAATTG GGGGTTTAGG GTTTAAGGAG AAAGTGATTT ATATGGTGAA ACAAAAGGGT GATGGTGGGA AAGTTGCCTT TTTGGAGAGT CTTGGTTTGA GTCTGTCTTC TGCTATGTAT TTGGCTCATT ACGTCTCCTC TGAATCGCTT CCCATACTTC TCGATAAGGT TAAGTACCTC AAGGAAATAT TCTTTTCTGG CAGTGATGAG AAAGGTCTTG TTGGAAAGTA TGCACGACGA ATGATGCTCT ACTTATCCAT TCCTATTGAT GAAGATGTTC AGCAAACTCT TTCCTTTTTC GAAAAGATTG AAGCAAGGCG TGGAGGCTTG GATATGCTGG GGTCTGTAGA TGCATCATTT AGATTTTTAA TCGAGTCATT CCCTCAGCTT CTTCTACTTT CAGAAGAAAA TGATATGAAG CCTATGGTAG AGTTTCTTGA AAGCATTGGT ATTCCTAAAT ATTGCTTGGG AAAGCTACTT CTTTTGTACC CTCCTATCTT GCTAGGCAAA ACTGAGGAGA TCAAAAGAAG GGTAGCCGCA GCTCTGGAGA AGCTTAGTGT AGTGGACAAG GATTCGGGAA AAGTGTTGCT GAAGTATCCT TGGATTCTCT CACCAAGCAT ACAAGAGAAC TATTCTCACA TCGTCTCATA TTTTTACAGT GAATCGGTGC TCAAAATGGA TATTGACCAC GCAATTAAGA GATGGCCTTT GCTTCTCGGT TGCTCAGCGA ACAATATGGA GATGATGGTG AAGGAATTTG ATAAATTAGG TGTTAGAGAT AAAAGAATGG GGAAGGTTAT ACCCAAGATG CCTCAGCTTT TGTTATGTAA ACCCCAAGAA TTTCTGAAGG TTGTTTGCTT TTTGGAAGAT TTGGGATTTC AAAAGGAAAT CGTGGGTCAA ATACTTTGTC GATGTCCTGA AATATTTGGC TGCAGCATTG ACAAGACCCT GCAGAAAAAG CTCATCTTTC TCACACGTTT TGGTGTTTCC ACTAGCCATT TCCCCCGAAT CATAAAGAAA TACCCGGAAT TTCTTCTATA CGACGCAGAC AAAACAGTAC TTCCACGGCT AAAGTACTTA ATGGAGATTG GGATATCGGA GAGAGAGATT GCCTTCATGA TTCGCAAATT CTCACCGATC TTGGGATATA GCATCGACAA AGTGTTGAGA CCGAAGTTTG AATTTCTGGT GAACAGCATG GAGAAGCCGC TTAGAGAGGT AATAGAATAC CCGAGGTACT TCAGTTACTC GCTGGAGAAA AGAATAAAAC CGCGGTTTTG GGTACTCAAA GGGAGGAACA TAGAATGTAC ATTACAGGAA ATGTTAGGCA AAAACGATGA AGAGTTTGCT GCTGATTTCT TGGGTTTAGG AGAGCTTCAA ACTCACAGTG AAACCTCTTA GTTAAGTTTC TTTGAGAAAA TCACACTATG TAATGAGATT GGTGATATCT CTGAAGACTG AAGCTTCTTC AGTTTTGTCT GTTTGCGTTG TTCATAGGTA GTGTATGTAC TTACTGTTCT TTTGTATACA AATTCCTAAC TTTATTTTAC CAAAAAAAAT CAGCTGATGT GT 
Length2042
Protein Sequence
Protein Residue
Map Locationscaffold_2: 17366080.. 17368798
Download Sequence
A.thaliana
AGI-codeAT1G78930.1
DescriptionMitochondrial transcription termination factor family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
10.3923 Ahg490379 Tetratricopeptide repeat (TPR)-like superfamily protein
15.2971 Ahg478388 Transducin/WD40 repeat-like superfamily protein
19.1833 Ahg894546 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
20.3961 Ahg919517 Sas10/Utp3/C1D family
20.6155 Ahg347545
21.2132 Ahg497128 Homeodomain-like transcriptional regulator
23.3666 Ahg940264
29.95 Ahg473739
31.8119 Ahg918474 Prolyl oligopeptidase family protein
31.9374 Ahg316209 CCAAT-binding factor
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression