Detail



ID : Ahg477067

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477067|fgenesh2_kg.2__2197__AT1G78980.1
Sequence
CCAAACCTCA AAAATATCTC TATCCCTAAA TTCAATCACA TTCTCTCAAA CCCGCGTCGT CTTGTCCGTG AAGCAAACCA GAAAGCATAA CCCTAACCCT GAAAACCCTA AATCCCTTTT TCTATCTTTC TTGCAAATCA AGATGACGCA GAAGCTCGTA AGCCTCTTGA TCGTCTCTCT GGCTATTATT GTCACTTTAG TTCAAGCAAA AACCGATAAC CAAGAAGTCT CCGGGTTGAA CGTAATGTTC ACGAGCTTAA ATTCGCCGTC CAAACTCAAA GGCTGGAAAC CTAACGGAGG TGATCCCTGC GACGGTTCTT GGGAAGGCGT CAAATGCAAA GGCTCTTCGG TCACCGAATT ACAGTTATCC GGCTTTGAGC TAAGTGGATC TCTCGGTTAT CTACTAAGCA ACCTCAAATC TCTCACAACT TTTGATCTCA GCAAAAACAA TCTCAAAGGA AACATACCTT ATCAACTCCC ACCCAACATT GTCAATCTAG ACTTTTCTGA AAACGAACTC GATGGAAACG TGCCCTACTC GTTATCTCAA ATGAAAAGTC TCCAAAGCAT TAATCTTGGA CAAAACAAGC TCAATGGAGA ACTACCAGAT ATGTTTCAGA AACTGTCAAA ACTCGTAACT CTGGACTTAT CGTTGAATCA ACTCTCTGGG AAATTACCTC AGAGTTTTGC TAATCTCACA AGCCTCAAAA AACTACACTT GCAGGAAAAT CGATTCACAG GCGACATAAA CGTTCTGAGG AACCTTGCCA TTGATGACTT GAACGTTGAA GACAACCAGT TTGAAGGATG GATCCCTAAT GAGCTTAAGG ACATAGACAG TTTACTGACT GGAGGTAACG ACTGGTCAAC TGAAACTGCA CCACCACCAC CACCGGGTGT TAAATATGGC CGAAAATCTT CGGGTTCTAA AGATGGAGGA GGTGTAACCG CCGGGAACGG AATGATGATC GCTGGAGCAT GTTTAGGAGT TCTTGTGTTG ATCGCTGTTT TAATTGCGCT CGTGTCCAAG AAAAAATCAT CTCTCTCACC TCATTTCATC GACGAAGACA ACAGTCATCA CACTCCAAAG TTCAAATCTA TTACCTCGCA TGGATCAGCG CAAGAGCTTC GTGTCGATTT CGGCAACGAT TACAAAGATG GGAAATCTGG AGATTCGGAT GATGAAAATA TCCATAGAAT AGGATCAAAG GGACTAAAAC ATTCTGTTTC GTCGCGTGTG ATGTCTTTCA CCGATACCGA ATTCGCAAAC AAGCTCAACG CGAAACGAAC CACTTCGACT CGTTCCACTG TGGAATTCGA GCTCTCTGAT TTGCAAAGCG CGACAGCCAA TTTCTCACCT GGAAATCTAC TCGGTGAAGG CTCAATCGGA CGTGTTTACA GAGCCAAGTA TTCCGATGGC CGCACATTAG CGGTTAAGAA GATCGATTCG ACGCTGTTTG ATTCGGGTAA ATCAGAAGGA ATAACGCCGA TTGTAATGAG CGTCTCGAAG ATTAGGCATC AAAATATAGC AGAGCTCGTA GGCTATTGCT CAGAGCAAGG TCACAACATG TTAGTCTACG AATACTTCAG GAATGGCTCA CTCCATGAGT TCCTTCATTT GTCAGATTGC TTCAGTAAAC CCTTAACTTG GAACACAAGA GTCAGAATCG CCTTGGGAAC CGCTCGAGCA GTCGAGTACC TGCATGAGGC ATGTTCGCCG TCTGAGATGC ATAAGAACAT CAAGTCTTCT AACATTTTGC TAGACGCGGA TCTCAACCCT CGTCTCTCAG ATTATGGCCT CTCAAAATTC TATCTTAGAA CGAGTCAAAA CCTAGGGGAA GGATACAATG CACCAGAAGC CAAGAACCCT TCTGCTTATA CACCAAAGAG TGACGTCTAC AGCTTTGGCG TCGTCATGTT AGAGCTTCTC ACCGGTCGAG TTCCATTTGA CGGAGAGAAG CCAAGGCCGG AGAGATCGTT GGTACGGTGG GCGACACCAC AACTTCACGA CATTGATGCA TTGTCGAATA TAGCGGATCC AGCTTTGCAC GGACTTTACC CACCAAAATC ATTGTCAAGA TTCGCCGACA TTATCGCATT ATGTGTACAG GTGGAACCAG AGTTCCGACC ACCGATGTCG GAAGTTGTGG AGGCGCTTGT ACGGATGGTT CAACGGTCAA GTATGAAGCT TAAAGATGAT CTTTCATCGT CTTATCGAGC CCACGACGAA TATGATTACT AGAGTAGTTA TGGAGAAAAG TAGTGACAAT ATTTAAATAT TTTTGTGTTC ATCTTTTCAT TTTTGGTGTA TTCCTTCGCT GGATAAACAT CCATCTGATT TTTTAAAAAG TAAAATTACA TAAATAAGTA A 
Length2371
Protein Sequence
Protein Residue
Map Locationscaffold_2: 17398360.. 17402243
Download Sequence
A.thaliana
AGI-codeAT1G78980.1
DescriptionSTRUBBELIG-receptor family 5
TAIR curator summary
Alias[SRF5][STRUBBELIG-receptor family 5]
Gene coexpression
MR
MR Locus Description
2.44949 Ahg943198
12.7279 Ahg932731
15 Ahg352197
20.199 Ahg489151
22.1359 Ahg919055 ankyrin repeat family protein
30.282 Ahg474922 Protein kinase family protein
31.0161 Ahg888093
31.0161 Ahg355896
33.541 Ahg356809
33.541 Ahg344530
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression