Detail


ID : Ahg477106

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477106|fgenesh2_kg.2__2236__AT1G79410.1
Sequence
GATGTAATAA TTCTCACATC CTCAAAAGTA AGCAACCATG GTGGATTCGT TGGCACCATC GTTGACCGCC CACCTTGAAG AAGATGAAGA CAGCTCTTAG CCTCTGACTT TCGACAAGAT CCTCGAACAA AGCTTGTCTG ATTTTGGATT CTCGCAGTTC TTACAGATAG TTCTCGTTGG GCTCGCTCTA ACCTTTGACG CACAGCAGAT ATTCATCACC GTCTTCACAG ATGCATATCC CACGTGGCAC TGTCTCGACC ACACGATCTG CAATCCGGCA ACGACCGATA TCTGTAAGAT TCCCCGGTCA GCTTGGGAGT GGGACGGTGG TTTCAAGGGT AAATCAGTCA TTTCAGAGTT CGATCTCGAG TGCTCAAGCT CCTTCCGCAG AAGTCTACCA AGTTCAACTT TTTATGTGGG TTCTATCGTT GGAGGAGTCG TCTTGGCTCT GATCCCTGAC GGTTCCTTGG GACGGAAGCA ACTTCTTTTC TTCTCGAGTT TTGCAATGTC CCTCACTGGA ATCTCCATTT TCTTATCCTC CAACATATGG ATCTACTCTT TCTTAAAATT CGTGATCGGT TTCGCCCGTT CCCAGACTGG GACATACGCG TTAGTTCTGA TAAGTGAGCG AGTTCCCACC AAATTGAGAC CACGAGCTAC TATGATTCCG TTTACTCTGT TTGTGTTAGG GTTCATGTCT CTGTCTGGAA TCGCTTACCT TGTCCGGCAC GCTTCCTGGA AAATTCTCTA TCTATGCACA TCCGTTCCTG CAGGAATCCA CAGTATTTTC ATCTATTTCT TTGCCCTAGA GTCCCCGCGT TGGCTCCATT TGGAAGGTAA GAACGAAGAA GCCATTGAAG TGCTCAAAAG GATTTCACCT GCAAACAAAG GTTACTTGGA ATCCGTATCT TCTAGGTTAC CTCCAAAAGA AACACTAGAC CAAACTTCAA GCTACTCCAT CAAGGACTTA TTCATTAGAA AATGGGCTTT TCAAAGAGTC ACACTTGTTA TGATCATAAT GTTTGGGTTG GGAATGTCCT ATTATGGAGT TCCATTAGCG GTTAGAGACA TAAAAGTGAA CATTTATTTG AGCGAAGCCC TAAACGCCAT GGTGGAGTTA CCAACATTTG TTGTTACACC GATATTGCTC GAGAAATTCA GCAGGAGAAG CTCTGTGCTT GTAAATTGCT TAATTGGAGG AGCATCAGGA GTGCTCTGTT TCGCCATGAG CCTTTACGGG AGAACAAAAA TCGCTTTCGC TCTCGAACTC GGTTCTTTCT TCTTCGCTAG GATTGGATTC AATTTAATGG CGGTTTATAT GGTTGAGCTA TTCCCTACAT GCGTGAGGAA TAGCGCAACA ATGATGCTTA GACAAGCGCT TGTGGTTGGA GGAGCTTGTT GCCCACTCAT TGCTTCGCTT GGAAGAAATA TTCCGTCACT CTCTTTCGCG GTTTTCGGAT TTGCAATGTC GGGTCTCGGG TTATTCGCGC TGCTTCTTCC TGAGACCAAA GGGTCAAGTC TTTGTGATAC AATGGAAGAA CAAGAGCAAA GAGACCAAGC CTTGAAGACT AGCCAAAGTT GATGAAAACA GAGTTTTTGA AAAACCTCGG TTCTTTTATT AAACTTTCGT ATAAAACCAT TTACTGTTAA GCTCCGGTTA ATCAAGCCAT ATGTTGATTT TCCGAGTAAT TAATATGTGA AACCTACAAA GGCATGTCTT GAATTCTTGA TAAACTGAAC CATTTCGTTT
Length1750
Protein Sequence
Protein Residue
Map Locationscaffold_2: 17586086.. 17587952
Download Sequence
A.thaliana
AGI-codeAT1G79410.1
Descriptionorganic cation/carnitine transporter5
TAIR curator summary
Alias[AtOCT5][OCT5][organic cation/carnitine transporter5]
Gene coexpression
MR
MR Locus Description
54.5252 Ahg487975 RNA-binding (RRM/RBD/RNP motifs) family protein
57.5934 Ahg485509 Disease resistance protein (TIR-NBS-LRR class) family
84.5222 Ahg337666 cellulose synthase like E1
85.7671 Ahg480666
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression