Detail


ID : Ahg477117

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477117|fgenesh2_kg.2__2247__AT1G79490.1
Sequence
TTCTAAAGCC TCTGGTTTTA GGGTTTAAGC CGACGGCCAT ATCTGGAGAC CAGGTTCGGA TTGATTCCTC AAATTTCAAT TCTTCGCATT ACATGACCCT ATAATAATTC CTTCTCTACA TCTTCGATGA TCCGTGGAAG AACCGCGAAA ATATTTCCCA GAAATGTCAT TTTTACGCTT AGTAGGAGTT CCATTTCTGA GGCTCTGGGT CGAATAAACC CTAGATTAGC CGGTAGTTTC TCCTTCAACA TCCGATTATT GAGCTATTTC ACTGTTAGAA ATGGCTTTTG TCCCGATTGT TCTGTACCTA GAGACCCTAA TTTTGTTGGA TTGACTACAC AAAGTCGGAG TATTTTCAGG AGATTGTGTA GTGAAAAGAG CGGAAGTAGT GAATCTAGTG GCTGGACTGA AGAGGTAGAG TATTTAGATG AGTCGGGTAG TGTATTACAC AGCGGTAAAG GAATAAGATC AGTAGAGCCA GGGCTTGATG ACCATGTAAT GGTTGGTGGG TTGAAGAAGC CTTACATGAA TGCTTCTGCT GTTGCAAAGA TTGTTGAAGT TGTCCAGAGG TGGAAATGGG GACCCGAGTT GGAGACTCAA TTGGATAAAC TCCAGTTTGT TCCCAATATG GTTCACATTA CGCAGTCTTT GAAGATTGTT AAAGAGGTTG ATGCTGCCTT GAGTTTGTTT AGGTGGGCTA AGAAGCAGCC TTGGTATCTC CCTTCAGATG AATGTTATGT CTTGTTGTTT GATGGGTTGA ACCAGGGCAG GGATTTTGTT GGGCTTCAGT CCTTGTTTGA GGAGATGGTT CAAGACTCGA GTAGTCACGG TGATTTGTCG CTTAGTGCGT ATAACCAAGT GATTCAGTAT TTGGCTAAAG CTGAGAAACT GGAGGTTGCT TTTTGTTGTT TCAAAAAGGC TCAAGAGTCG GGATGCAAAA TTGATACTCA GACATATAAT AATCTAATGA TGTTGTTTCT GAACAAAGGT CTGCCGTATA AAGCATTTGA GATTTATGAG AGCATGGAGA AAACTGATAG TTTGTTGGAT GGGTCAACTT ATGAGCTGAT AATTCCAAGC TTGGCCAAAT CCGGCCGTCT TGATGCAGCT TTCAAGCTTT TTCAGCAGAT GAAAGAAAGG AAACTTCGAC CAAGCTTTAG TGTGTTTTCT TCACTTGTTG ATTCAATGGG AAAAGCTGGT CGCTTGGACA CATCAATGAA GGTTTACATG GAAATGCAGG GATTTGGCCA TAGGCCATCA GCAACTATGT TTGTTTCCTT GATTGATTCA TATGCTAAAG CTGGTAAGCT GGATACTGCT CTTAGGCTTT GGGATGAGAT GAAGAAGTCA GGTTTCAGGC CAAACTTTGG ATTGTACACA ATGATCATCG AATCTCATGC AAAATCAGGA AAGCTTGAAG TAGCAATGAC AGTTTTCAAA GACATGGAGA AAGCTGGGTT TTTACCAACA CCTTCCACAT ATTCGTGTCT ATTGGAGATG CATGCTGGAT CCGGGCAAGT AGACTCTGCA ATGAAGATCT ATAACTCCAT GACTAATGCT GGGTTAAGGC CTGGCCTGAG CAGTTATATC TCACTTCTTA CACTTCTGGC CAACAAAAGA CTCGTCGATG TTGCCGGGAA GATACTACTC GAGATGAAAG CAATGGGGTA TTCCGTAGAT GTCTGCGCTA GCGATGTTTT GATGATATAT ATCAAAGATG CTTCTGTGGA TCTTGCTCTG AAATGGCTTA GGTTCATGGG TTCTTCAGGG ATCAAAACAA ACAATTTCAT CATCAGGCAG TTATTCGAAT CATGCATGAA AAATGGTCTA TACGATTCAG CTAGGCCTTT GCTCGAGACA CTCGTGCATT CTGCTGGAAA AGTTGACCTG GTGCTTTACA CTTCGATTCT CGCCCATCTT GTCCGATGCC AAGACGAAGA TAAAGAGAGA CAATTGATGT CAATCCTCAG CGCTACCAAG CATAAAGCAC ATGCCTTTAT GTGTGGTCTC TTCACGGGTC CAGAACAGAG GAAACAACCA GTTCTAACGT TTGTCAGAGA ATTTTACCAA GGGATTGATT ACGAACTCGA AGAAGGAGCT GCTAGATACT TTGTCAATGT CCTTCTCAAC TACCTTGTCT TGATGGGTCA AATAAACCGA GCTCGATGTG TCTGGAAAGT AGCCTACGAG AACAAACTCT TCCCAAAGGC CATCGTCTTT GACCAACACA TTGCTTGGTC TCTCGATGTG AGAAACTTAT CGGTTGGAGC TGCGCTCATA GCAGTGGTTC ACACTCTCCA CAGGTTCAGA AAACGAATGC TTTACTACGG TGTAGTCCCG AGACGTATAA AGCTAGTCAC AGGACCGACA CTGAAGATTG TAATTGCTCA GGTGCTGAGC TCTGTTGAGT CGCCTTTTGA GGTCAGCAAA GTTGTCTTGA GAGCACCGGG AGATTTGGTC ATGGAGTGGT TCAAGAAACC GATAGTGCAA CAGTTTCTTC TGAACGAGAT CCCGTCTCGG TCTGATATAT TGATGCATAA GATGAACGTG ATGTTTCCAA GCTCGGCTCC TGAGCTTAGA TCTATGTCAC CTCCCAAACC ACTCATGTCG TCGAAATCGT TCTAACCTCT GTTTCAGATC TCTCATTGTT
Length2650
Protein Sequence
Protein Residue
Map Locationscaffold_2: 17622384.. 17625092
Download Sequence
A.thaliana
AGI-codeAT1G79490.1
DescriptionPentatricopeptide repeat (PPR) superfamily protein
TAIR curator summary
Alias[EMB2217][embryo defective 2217]
Gene coexpression
MR
MR Locus Description
12.4097 Ahg920821 NAP1-related protein 2
14.4914 Ahg475671 Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1
20.347 Ahg931405 hexokinase 2
25.6125 Ahg495837
26.3439 Ahg473739
33 Ahg490115 Tetratricopeptide repeat (TPR)-like superfamily protein
34.1174 Ahg920450 periodic tryptophan protein 2
35.9444 Ahg329212 hydroxyproline-rich glycoprotein family protein
36.2077 Ahg478051 NagB/RpiA/CoA transferase-like superfamily protein
51.3809 Ahg495674 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression