| Annotation |
|---|
| Description | jgi|Araly1|477121|fgenesh2_kg.2__2251__AT1G79530.1 |
| Sequence |
AACATATTGG ATTCTTCACG TTTGTTTGTT TATAATTTTG GTTGGCTCTA CACCTACTCT CAGAAGTCAG AAGCCAAGCA AAGGTGTTTT AGGGTTTTTG ACCGCGAGCG AGATCTCTCT CTTTGTTTCT CCAGTTCCGA ATCAATGGCC TTCTCTTCTC TCCTCAGATC TGCCGCCGCC TCCACGGTTG CCGCTCCTCG CCCTGACTTT TTCTCGTCGC CGGCGTCTGA TCATTCTAAG GTGTCCTCAA GTCTTGGATT TAGTCGCAAC CTGAAACCAT CGAGATTTTC TTCTGGGATA TCTTCGTCTA TACAAAAAGG CAATGCAAGA AGTGTGCAAC CCATCAAGGC CACGGCTACA GAAATGCCAT CTGCACTTCG AAGGTCAAGT AGCAGTGGAA AGACAAAGGT TGGGATCAAC GGTTTTGGTC GGATTGGAAG GCTGGTCCTC CGCATTGCAA CATCCAGGGA TGACATTGAT GTTGTAGCAG TGAATGACCC ATTCATTGAT GCCAAGTACA TGGCTTACAT GTTGAAGTAT GATTCTACTC ATGGAAATTT CAAGGGAAGC ATCAATGTCA TTGATGATTC TACTTTGGAG ATCAACGGGC AGAAGGTCAA TGTTGTCAGC AAGAGAGATC CAGCTGAGAT ACCATGGGCT GATCTTGGAG CTGATTATGT TGTTGAGTCT TCCGGTGTAT TCACCACCTT GTCAAAGGCT GCATCCCATT TGAAGGGCGG TGCCAAGAAA GTTATAATTT CTGCCCCTTC AGCTGACGCA CCTATGTTTG TTGTTGGGGT AAATGAGAAG ACATACCAAC CAAACATGGA TATAGTCTCC AATGCAAGTT GTACCACCAA TTGTCTTGCC CCTCTTGCGA AGGTGGTGCA TGAGGAATTT GGTATTCTTG AAGGCTTGAT GACAACTGTC CACGCAACTA CAGCTACTCA GAAAACTGTT GATGGGCCAT CAATGAAGGA CTGGAGAGGA GGTCGGGGCG CTAGTCAAAA CATCATTCCT AGCTCAACCG GCGCCGCTAA GGCTGTAGGT AAAGTTCTTC CAGAACTGAA TGGGAAACTT ACGGGAATGG CCTTCCGTGT ACCAACATCG AATGTTTCTG TGGTGGATTT AACTTGTCGA CTTGAGAAGG GTGCCTCTTA TGAAGATGTT AAAGCAGCCA TTAAGTATGC CTCAGAAGGA CCTCTTAAAG GCATTCTCGG GTATACAGAT GAAGATGTCG TCTCCAACGA TTTCGTCGGT GATTCAAGGT CCAGTATCTT TGACGCCAAT GCTGGGATTG GATTGAGCAA GTCCTTTGTG AAACTTGTCT CTTGGTACGA CAACGAATGG GGTTACAGCA ACCGAGTTCT TGACCTTATA GAGCACATGG CTTTGGTAGC AGCCAGCCAC TAAATACACA CCAGTTCTTG CAGAAGCTTG AGACTTTCTG CTTTTTGCGT AACCTGCTCT ACAAAGCCGG ATTGGATTTG TTCGGTTCAA TTAGGTGCTA GGTGTTTTGA GAAATTTGGT TTGAATCACG AGCCTATCTT CTATTTTTGT TTTGTTCCAG TATGAGCAAC TACGGAAACT AGATTGGGTC CAAAAGACTA AAAACTGTGC GACTTACATC TATCAAATAA GGGGCTAAAC TTGTTGTACT TTACCAAAAA TAGCTTACCA GTATAAGCAA CAATTGTTTG GAAGCTTCTT GATAATGAGT GCATCGTTAG CTTTGCCCGT GCTTATGAC |
| Length | 1749 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 17638914.. 17642251 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G79530.1 |
| Description | glyceraldehyde-3-phosphate dehydrogenase of plastid 1 |
| TAIR curator summary | Encodes one of the chloroplast/plastid localized GAPDH isoforms (GAPCp1/At1g79530 and GAPCp2/At1g16300). gapcp double mutants display a drastic phenotype of arrested root development, dwarfism and sterility. GAPCps are important for the synthesis of serine in roots. |
| Alias | [GAPCP-1][glyceraldehyde-3-phosphate dehydrogenase of plastid 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2 |
Ahg896294 | O-fucosyltransferase family protein |
| 7 |
Ahg479261 | |
| 17.2337 |
Ahg485258 | RNA polymerase III subunit RPC82 family protein |
| 23.8118 |
Ahg922934 | pre-mRNA-processing protein 40A |
| 25.04 |
Ahg920006 | oxidoreductase, 2OG-Fe(II) oxygenase family protein |
| 37.2559 |
Ahg890515 | Histone H3 K4-specific methyltransferase SET7/9 family protein |
| 41.0122 |
Ahg472836 | NAD+ transporter 2 |
| 52.2494 |
Ahg479925 | KRR1 family protein |
| 53.4416 |
Ahg935251 | Ypt/Rab-GAP domain of gyp1p superfamily protein |
| 61.563 |
Ahg918566 | RADIATION SENSITIVE 17 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|