Detail


ID : Ahg477122

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477122|fgenesh2_kg.2__2252__AT1G79540.1
Sequence
ATGAAACCAC AGATGTTCTT TCGATCAGTC ATTCAGTTCT ATTCAAAGCC GTCATGGATG CAACGTTCCT ACTCTTCCGG TAACGCCGAA TTCAATATCT CCGGCGAGGT CATCAGCATT CTAGCTAAGA AGAAACCTAT AGAGCCTGCT TTAGAGCCGC TTGTTCCGTT TCTCTCGAAG AATATCATCA CATCGGTAAT CAAAGAGGAG GTCAATCGAC AATTAGGATT CCGTTTTTTT ATATGGGCGT CGAGAAGAGA GCGTCTCAGG AGCGGAGAGT CTTTTGGTTT GGTCATCGAT ATGCTCTCTG AAGATAATGG GTGCGATCTA TACTGGCAGA CATTGGAGGA GCTTAAATCT GGAGGCGTCT CTGTCGATTC TTATTGCTTC TGTGTTCTGA TCTCGGCTTA TGCTAAGATG GGTTTGGCGG AGAAAGCAGT GGAATCGTTT GGAAGGATGA AGGAGTTTGA CTGCAGACCC GATGTGTTCA CCTACAACGT GATATTGCGA ATCATGATGC GAGAAGATGT CTTCTTTATG TTGGCTTTTG CTGTGTACAA TGAAATGCTC AAGTGTAATT GTTCCCCAAA TCTATACACG TTTGGTATCT TGATGGATGG ATTGTATAAG AAAGGAAGAA CGAGTGATGC ACAGAAGATG TTCGACGATA TGACCGGTAG AGGAATTTCG CCTAACAGAG TTACCTATAC CATTCTCATT TCAGGTTTGT GTCAGAGAGG AAGTCCTGAA GATGCACGAA AGCTATTCTA CGAGATGAAA GCGAGCGGTA ACTATCCTGA TTCCGTCGCA CACAATGCTT TGCTTGATGG GTTTTGTAAA TTAGGTCGGA TGGTTGAAGC ATTTGAGCTG TTGCGGCTTT TTGAGAAAGA TGGTTTTGTG CTTGGTCTTC GAGGTTATAG CAGTCTAATC GATGGATTGT TCAGAGCTAG GAGATACACT CAGGCATTTG AGCTGTATGC AAATATGCTG AAGAGGAATA TTAAACCTGA CATCATTTTG TACACGATAT TGATTCAAGG GTTATCTAAA GCCGGTAAGA TTGAGGATGC ATTGAAGCTG TTACGCAGCA TGCCAAGTAA GGGCATTACC CCAGATACCT ACTGCTACAA TGCTGTTATA AAGGCTCTAT GTGGGAGGGG ACTTTTGGAA GAGGGTCGGT CCCTCCAACT CGAGATGTCA GAAACGGAAT CCTTCCCTGA TGCGTGCACA CACACAATTC TTATTTGTAG CATGTGCAGG AATGGGCTGG TAAGGAAAGC CGAAGAAATT TTTTTGGAGA TTGAGAAGAG TGGTTGTTCT CCTTCGGTTG CTACTTTTAA TGCTTTAATC GATGGACTGT GCAAGTCCGG TGAGCTCAAG GAAGCCAGGT TATTGTTGCA TAAAATGGAG GTCGGGAGAC CTGCTTCCTT GTTTCTAAGG CTTGCGCACA GTGGAAACCG GAGTTTTGAC ACCATGGTTC AATCTGGTTC GATTCTCAAG GCATACAAGA ATCTTGCACA TTTTGCTGAT ACCGGGAATT CGCCAGACAT TGTTTCTTAC AATGTTCTTA TAAACGGGTT CTGCAGAGAG GGAGACATTG ACGGTGCTCT CAAGCTTCTC AATGTGCTTC AACTAAAGGG TTTATCCCCT GACAGTGTCA CTTACAACAC TCTCATCAAC GGACTTCATA GAGTCGGCAG AGAAGAAGAA GCTTTTAAAC TCTTTTATGC TAAAGATGAT TTTAGACACA GTCCTGCGGT TTACAGATCG CTCATGACAT GGTCATGTCG AAAAAGAAAG CTCTTGGTGG CTTTTAATCT ATGGATGAAA TACCTAAAGA AGATATCTTG CCTGGATGAT GAAACAGCTA ATGAGATTGA ACAATGTTTC AAGGAAGGGG AAACCGAGAG AGCTTTAAGA CGACTTATTG AATTGGATAC CAGAAAAGAC GAGTTAACGT TAGGGCCTTA CACGATATGG CTGATCGGGT TATGCCAATC AGGGAGATTT CACGAGGCCT TGATGGTGTT TTCGGTTTTA AGGGAGAAGA AGATCCTTGT CACACCTCCG AGTTGTGTCA AACTGATTCA TGGACTCTGC AAAAGAGAAC AACTTGATGC AGCAATAGAT GTGTTCTTAT ACACTCTAGA TAACAACTTC AAGCTGATGC CTAGAGTTTG CAACTACCTC CTAAGCTCCC TCCTCCAATC TAGAGAAAAG ATGGAGATTG TTTCGCAACT TACAAACAGA ATGGAACGTG CAGGGTACGA TGTTGACTCG ATGCTTCGAT TCGAGCTTTT GAAACATCAT AGATATAGAA AGCAGGTCCT GATAGATCTT TAGGTAATGA AATGATACGT AAAGGTATAT CTACATCCGG ATTCATTGGC GCCGGTTTTG TCGAGAAGAG AAATTTGAGT TTTGATTCAG TCTCTTTACC TTAACATTAC ATTAGAGTAG AAGAATCTCT GGAAGAGGAA AAGGAAAAGG AAAAAACATG AGGTTATACG TAAATGCTTT ATTTATAGAG TCGTTTTTGA AGATTTTCCT TATCTTTATT GTACACTGAT TTGTTATGT
Length2579
Protein Sequence
Protein Residue
Map Locationscaffold_2: 17642894.. 17645508
Download Sequence
A.thaliana
AGI-codeAT1G79540.1
DescriptionPentatricopeptide repeat (PPR) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
8.48528 Ahg483517 inositol 1,3,4-trisphosphate 5/6-kinase 4
12.7279 Ahg480455 AAA-type ATPase family protein
16.4924 Ahg891028 DNA-binding storekeeper protein-related transcriptional regulator
22.8473 Ahg497488 eukaryotic translation initiation factor 2
24.2693 Ahg314800 Polynucleotidyl transferase, ribonuclease H-like superfamily protein
24.4949 Ahg318821
26.0768 Ahg489460
32.4037 Ahg477043 UDP-Glycosyltransferase superfamily protein
33.1512 Ahg923663 Ubiquitin-conjugating enzyme family protein
46.9042 Ahg336766 Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression