Detail



ID : Ahg477520

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477520|fgenesh2_kg.3__221__AT3G02780.1
Sequence
GCATCAGTGA TCAGCACATG CGAGACACCA ACACCAATGT CTGCTTCTTC TTTATTTAAT CTCCCATTGA TTCGCCTCAG ATCTCTCGCT ATTTCGTTTT CTTCTTCTTT CCGATTTTCA CATCGTCCTC TGTCATCGAT TTCCCCGAGA AAGTTACCGA CTTTTCGTGC TTTCTCTGGT ACCGCAATGG CAGATACTAA AGATGCTGGT ATGGATGCTG TTCAGAGACG TCTCATGTTT GAGGATGAAT GCATTCTTGT TGATGAAACT GATCGTGTCC TGGGGCATGA CAGCAAATAT AATTGTCATC TGATGGAAAA TATTGAAGCT AAGAATTTGC TTCACAGGGC TTTTAGTGTA TTTTTATTCA ACTCGAAGTA TGAGTTACTT CTCCAGCAAA GGTCAAACAC AAAGGTTACA TTCCCTCTCG TGTGGACAAA CACTTGTTGC AGCCATCCTC TTTACCGTGA ATCAGAGCTT ATCCAAGAAA ATGCACTAGG TGTGAGGAAT GCTGCACAAA GAAAGCTTCT CGACGAGCTT GGTATTGTAG CTGAAGATGT ACCAGTCGAT GAGTTCACTG CCTTGGGACG TATGCTATAC AAGGCTCCTT CTGATGGGAA ATGGGGAGAG CACGAACTTG ATTACTTGCT CTTCATCGTG CGGGATGTGA AGGTTCAACC AAACCCGGAT GAAGTAGCTG ATATCAAGTA TGTGAGCCGG GAAGAGCTGA AGGAGCTGGT GAAGAAAGCA GATGCAGGTG AGGAAGGTTT GAAACTGTCA CCATGGTTCA GGTTGGTGGT GGACAATTTC TTGATGAAGT GGTGGGATCA TGTTGAGAAA GGAACTTTGG GTGAAGCTAT AGACATGAAA ACCATCCACA AGCTCTAAAC ATCTTTTTTT A 
Length901
Protein Sequence
Protein Residue
Map Locationscaffold_3: 689394.. 691404
Download Sequence
A.thaliana
AGI-codeAT3G02780.1
Descriptionisopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase 2
TAIR curator summaryEncodes a protein with isopentenyl diphosphate:dimethylallyl diphosphate isomerase activity. There is genetic evidence that it functions in the mevalonate, but not the MEP biosynthetic pathway.
Alias[IDI2][IPIAT1][IPP2][ATISOPENTENYL DIPHOSPHE ISOMERASE 2][isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase 2]
Gene coexpression
MR
MR Locus Description
13.4907 Ahg483814
15.3297 Ahg472541 COP9 signalosome 5A
20.4939 Ahg479619 translocation protein-related
21.7945 Ahg336171 toprim domain-containing protein
22.0454 Ahg934539 CAX-interacting protein 2
28.1425 Ahg345419 zinc finger (C2H2 type) family protein
34.2053 Ahg337393 Ribosomal protein L22p/L17e family protein
37.4166 Ahg952183 FK506- and rapamycin-binding protein 15 kD-2
43.6807 Ahg493196 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
52.9906 Ahg489475 TCP-1/cpn60 chaperonin family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression