Detail



ID : Ahg477669

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477669|fgenesh2_kg.3__370__AT3G04090.1
Sequence
GAGGAGAAAA ATAGCTGTGA CAAAGCTAAA GAGGCGACGT ACCTAACCAC AACCAGATCC CCAAAAACAG AGAACTTCTC GATACGAACG CCAAAGAGAA GATGATGGGT GTGGTGAAGT CGGCGATTGG GGATATGTTG ATGACCTTCT CTTGGGTTGT CCTCTCCGCG ACCTTTGGAA TTCAGACGGC GGCGATTATC TCCGCCGGCG ATTTTCAGGG AATCACTTGG GCTCCGTTGG TGATCTTGAC GTCGTTGATT TTCGTCTACG TCTCGATCTT CACCGTTATC TTCGGTAGCG CTAGCTTCAA TCCTACCGGA AACGCCGCCT TTTATGTCGC CGGTATCCCC GGAGATACTC TTTTCTCCTT GGCGATTAGA TTACCTGCTC AGGCAGCTGG TGCGGCAGGA GGTGCATTGG CCATCATGGA GTTCATACCA GAGAAATACA AGCATATGAT TGGAGGACCT TCTCTTCAGG TTGATGTGCA CACTGGAGCT ATTGCAGAAA CGATCTTAAG TTTTGGTATT ACCTTTGCGG TTTTGCTAAT TATCCTCCGT GGTCCACGGA GATTGCTTGC TAAGACGTTC TTGCTTGCTC TTGCAACCAT CTCATTTGTT GTCGCCGGGT CTAAATACAC TGGACCAGCC ATGAATCCTG CCATTGCATT TGGGTGGGCA TACATGTACA GCTCCCACAA CACATGGGAC CATATCTACG TCTACTGGAT CAGTTCTTTC GTAGGAGCAT TATCTGCTGC GTTGCTCTTC CGTTCCATCT TCCCTCCACC TCGGCCCCAG AAGAAGAAAC AAAAGAAAGC CTGAGGAAAA CCAGTTGGGA GAACACCGGT CAGATTCTTC ACCGGTTTGG GCTGTAGAAA GAAAGATTAA GAAAATTGTT CCATTCTTAA ATAAGGAGA 
Length919
Protein Sequence
Protein Residue
Map Locationscaffold_3: 1282065.. 1283740
Download Sequence
A.thaliana
AGI-codeAT3G04090.1
Descriptionsmall and basic intrinsic protein 1A
TAIR curator summaryBelongs to a family of plant aquaporins. Similar to yeast and radish aquaporins. Located on ER.
Alias[SIP1;1][SIP1A][small and basic intrinsic protein 1A]
Gene coexpression
MR
MR Locus Description
6.32456 Ahg496774 general regulatory factor 8
6.7082 Ahg478622 A20/AN1-like zinc finger family protein
10.0995 Ahg934359 PLAC8 family protein
11.4891 Ahg321881
14.9666 Ahg494224 RGPR-related
15.4919 Ahg485174 B12D protein
15.6844 Ahg476480 Protein kinase superfamily protein
16.4317 Ahg472118 DDT domain superfamily
17.5784 Ahg482750 ARF-GAP domain 7
19.2094 Ahg480076
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression