Detail



ID : Ahg477698

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477698|fgenesh2_kg.3__399__AT3G04380.1
Sequence
TTTAGGGCAT TTATCAATTC AAAAATTGAT TAATTTTTTA AGCTCGAGCT CTTTGCATGC AAATCATTCG CCGTCTTCTT CCACAATTGT GTTTTTTAGC CGGCGGCTGG ATTCGAGAAG CTTCCGATTG CTCTGTATAG TCTCTCTCTG TGTATTTGCA GGTTCTGTTG AAAGTGATCT TGATATGCAA CAAGCGATGC TCCCCAATAA AGACGAGAAG GTACGCGAAG CTTTAGAGAA AACAAGGGAA TTGGGTATTG CCGATGAAAA GACAATGCCA GTGCTTACGA AGCTCCTAGA AGAGGCTGAT GGCAATTGGT CATTAATAAA ATTGGATAAC TATACTGCAC TTGTCGACGC TATTCTTTCT GTTGAGGAAG AGAAGAAGCA AAGTGAAGGT TCATCTAATG GCAATAGAGG GAAGAATCTT AAGGTCATTG GCTCTCCTGC TACTCTGAAA AAAACTTACG AAACCCGTTC TGCATCCTCA GGTTCGTCCA TTCAGGTAGT CCAGAAGCAG CCACAGATTA GCAATGGTGA TCGCAAGAGG AAATATAAAA GCAAAATTTC TGACATAACT AAAGGTTCAG AGAGCGTTAA AATATCTCTT GTAGATGATG TTGGGAGTGA AGCTGTGCCG AAGTTTACTT ACATCCCTCA CAACATTGTA TACCAAAGTG CTTATCTCCA CGTGTCTCTG GCTCGAATTT CTGATGAAGA TTGCTGCGCG AACTGCAAAG GGAACTGTCT TTCAGCTGAC GTTCCTTGCA CTTGTGCTCG TGAAACCAGT GGAGAATATG CTTATACCAA AGAAGGGTTG CTAAAGGAAA AGTTTCTGGA CACCTGTCTT AAGATGAAAA AGGAACCAGA TACGTTCCCT AAAGTTTACT GCAAAGACTG CCCTTTGGAG AAACATCACG ATAAGGGCAC ATATGGAAAA TGTGATGGAC ACTTAATCCG GAAGTTCATC AAGGAATGCT GGAGAAAGTG TGGATGTGAT ATGCAGTGTG GAAATCGAGT AGTACAGAGA GGGATAAGGT GCGAACTGCA GGTTTACTTT ACTCAAGAAG GGAAAGGATG GGGTCTTAGA ACACTGCAAG ACTTGCCAAA AGGAACCTTT ATCTGTGAAT ACATTGGTGA AGTATTGACC AACACGGAGT TATACGACCG GAATGTAAGG TCTAGTAGTG AACGGCATAC ATATCCTGTA ACTCTGGATG CAGACTGGGG TTCTGAAAAG GATCTAAAAG ATGAAGAAGC TCTCTGCCTG GATGCCACAA TCTGTGGAAA TGTCGCAAGG TTTATCAATC ACAGATGCGA GGATGCAAAC ATGATTGATA TTCCGGTAGA AATAGAGACG CCTGACAGAC ATTATTATCA TATTGCCTTT TTTACCCTAC GGGACGTGAA GGCCATGGAT GAGTTGACAT GGGATTACAT GATAGACTTC AATGATAAAA GTCATCCTGT AAAGGCATTT AGATGTTGCT GCGGAAGCGA ATCATGCAGA GACAGAAAAA TAGAAGGATC TCAAGGCAAG TCTTTAGAGA GAAGAAGGGT TGTTCCTGCT AAAAAACAAC AAGGTTCCAA AGCGGTGGCT TTAAAGCGCA AATGAGACCG ATCAATATTT AGAGTTAAAC ATTAAAGAAA ACATGAAACC GCAAAACACT TTGCTCCATA ATGAGCTCTG CATAATTCAG CTAGCTTTCC TGGTTGATGA TATAACTTTT ATGGTCTGCA GATTTTTTTT TCCCCGTACA ATCTCTTCTT TGTTATGTTG CCTAACTAAA GAAACTCACT GTTAGTTCTG TTCTTGAAAT TTCATGGCAT ACAAAATAAA TGAACATTTT TTTTGTAGTG TTAAACAAAA TTTTAT 
Length1876
Protein Sequence
Protein Residue
Map Locationscaffold_3: 1398384.. 1401979
Download Sequence
A.thaliana
AGI-codeAT3G04380.1
DescriptionSET-domain containing protein lysine methyltransferase family protein
TAIR curator summaryEncodes SUVR4, a nucleolar histone methyltransferase with preference for monomethylated H3K9. One of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain.
Alias[SDG31][SUVR4][SET DOMAIN PROTEIN 31]
Gene coexpression
MR
MR Locus Description
34.9428 Ahg941090 NSP-interacting kinase 1
48 Ahg486432
65.5896 Ahg931867 hydroxyproline-rich glycoprotein family protein
66.5432 Ahg918929 cellulose synthase-like D5
89.4092 Ahg334084
91.8695 Ahg471760 centromere protein C
92.0109 Ahg943572 DHHC-type zinc finger family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression