Detail



ID : Ahg477744

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477744|fgenesh2_kg.3__445__AT3G04750.1
Sequence
ATGTGCTTTG TGTTGTTGCG GCGAGGAATT CGATTGTTTG GCACAGAATG TGGGAGCAAG ACAACAACAT GGGATCCTGT TCAATCACTT CAGCTGAATC ATCAATCTCT TGTCTTGCTC GAGAAATGCA GTTCCAGGAA TCAATTCAAG CAGGTTTTGG CACAGATCAT GCGTTTCAAT CTCATCGGCG TTACGTTTCC CATGAGCCGT CTTATCTTCT TCTCGGCGAT CACATACCCA GAGAATCTCG ACTTGGCGAA GCTTCTGTTT CTTAATTTCA CTCCGAATCC GAATGTTTTT GTTTACAACA CAATGATCTC TGCTGTTTCG AGCTCCAAAA ATGAATGCTT TGGTCTGTAT AGTTCTATGA TTAGGTACCG TGTTTCTCCG GACAGGCAAA CGTTTCTCCA TCTCATGAAA GCTTCGAGTT TTCTGTCGGA AGTGAAGCAG ATCCATTGTC ATATCATTGT TTCTGGGTGT TTGTCTCTTG GGAATTACCT GTGGAATTCT CTGGTTAAGT TTTACATGGA GTTGGGAAGT TTGGGTTTTG CCGAGAAGGT GTTTGCTATA ATGCCTCAAC CAGATGTCAG CTCTTTTAAC GTTATGATTG TTGGTTATGC GAAGCAGGGG TTTGGTTTAG AGGCACTGGA ACTGTATTAT AAGATGGTTA GTGATGGTAT TGAACCTGAT GAGTACACAG TGCTGGGTCT TCTACTTTGT TGTGGTCATT TATCAGATAT TAGGCTTGGG AAGGGAGTTC ATGGTTGGAT TGAGAGGAGA GGACCTGTTT ATTCATCTAA TTTGATTCTG AGCAATGCTC TTTTGGACAT GTATTTCAAA TGCAAAGAAT CCGGACTTGC TAAAAGAGCT TTTGATGCGA TGCAGAAGAA AGACATGCGC TCTTGGAACA CCATGGTTGT TGGGTTTGTT AGGCTTGGGG ACATGGAAGC TGCTCAGTCT GTTTTTGATC AGATGCCCCA ACGGGATCTT GTTTCTTGGA ATTCTCTGCT TTTTTGTTAC TCGAAGAAGG GATGTGACCA AAGAGCCGTC AGAGAATTGT TCTATGAAAT GCTGATCGTG GAGAAGGTCA AGCCAGACCG CGTCACTATG GTTAGTTTGA TAAGTGGTGC AGCAAACAAC GGAGAACTGA GCCATGGAAG ATGGGTGCAC GGATTAGTGA TCCGTCTGCA ACTGGAAGGT GATGCCTTTC TGAGTTCGGC TCTGATAGAT ATGTACTGCA AATGTGGTCT CATTGAGCGG GCTTTCATGG TTTTCAAGAC AGCTACTGAG AAAGATGTTC CGCTATGGAC ATCAATGATA ACTGGGTTGG CCTTCCATGG AAATGGCCAG CAAGCTCTGC AGCTATTCAA AAGAATGCAA GAAGAAGATG TGACGCCAAA CAAAGTCACT CTGCTCGCTG TCCTGACAGC TTGCAGTCAC AGCGGACTTG TGGAGGAAGG GCTTCACGTT TTCTACCACA TGAAGGAAAA ATTCGGCTTT CACCCTGAAA CCGAGTATTA CGGAAGCCTT GTGGATCTGT TGTGTAGGGC AGGGAGAGTA GAGGAAGCGA AAGACATAGT GCAAAAGAAG ATGCCAATGA GACCAAGTCA GTCAATGTGG GGATCAATTT TAAGTGCTTG TCGGGGAGGT GAAGACATTG AAACCGCAGA GTTGGCTTTA TCGGAATTGC TTAAGTTGGA ACCTGAAAAA GAAGGCGGAT ACGTTTTGTT GTCTAATATA TATGCAACCG TTGGAAGATG GGGATATTCA GACAAGACGA GAGAAGCAAT GGAGAGTAGC GGAGTAAAGA AGACTGCAGG ATATAGTAGT GTAGTTGGAG TAGAGGGAGT TCATAGCTTT GTGGCTGCAG AGAAGCAGAA CCATCCAAGA TGGACGGAGA TAAAAAGAAT ATTGCAGCAT CTGCATAACG AAATGAAGTC AAAAATTGGA TCGTTGGACT TGTTAGGAAC ATAG 
Length1974
Protein Sequence
Protein Residue
Map Locationscaffold_3: 1569521.. 1571495
Download Sequence
A.thaliana
AGI-codeAT3G04750.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.47214 Ahg946417
9.05539 Ahg936653 Protein of unknown function (DUF185)
22.6716 Ahg477950 HCO3- transporter family
23.622 Ahg488711 Pentatricopeptide repeat (PPR) superfamily protein
30.8221 Ahg896391 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
34.1174 Ahg471082 Pseudouridine synthase family protein
52.9622 Ahg347545
53.6656 Ahg476606 tRNAse Z1
60.597 Ahg489778 calcium ion binding
76.5637 Ahg944131 MRG family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression