Detail



ID : Ahg477927

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477927|fgenesh2_kg.3__628__AT3G06270.1
Sequence
CGATAATCTC AAAAAGTTTT TGGTTTGATT TGGGAATTCG TGCGCGGCTG TGGCAGAGGC CAAACCCACC CGTGTACCAT CCGTCGGATC CACCAAACCA AAGTCTCATC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTT CTTCTTCGTT TTCTTCTCGA ACAAATTCCT CTGCTTTGGC ATTTTAGGGT TTCTCAAATT TTGACGCTTT CTCTTAAAAG GGTTGACGAC ATAACCCTTT GGGAGAAAAA ACAAAGGTTG AGGAAGACCC CCAAGGAAAA AAGAAAGAAG AATTCGAACA ACAACAACAA CAACAACAAC AAGATAAAGT TACGAATTTT CCCTCTTTGT AACCTTTGTT TCTCTTCTTC CTCTTCCTCT ACTTTTTTCC ATAAAGATTC TGCCTTTGGA TTTCAATTTC GTCTTCCTTT TTCGATTTTG CCGCGTTTAA CATGACATCT GCAAAACCCT ACCCTTTTGT GGACGCCATT GTTGATTCCC ACGAATTTCG TTTTCCTAGA GATTGCTTGT TCTAGCCCGA GCTAGGAGCT CAAGATTTTT GAAGGAAAGT TTCGTTTTTT TTTTCTTTTT TGCGGAATCG AATCTGTTTT CTGCGTTATG GGTTGTGTTC AATGCAAATG TTGTAGCCGA TATCCGTCGT CATCATCAGA TGGAGATTCT CGGGGACCTT TAGAAGCCAA TGGTGTTCTC AAAGGGAAAG ATCAGAAACC TCTTGGATCT ATTCACGTTC CTTCTCCTAA TTTCGACATG GTTTACTCTG TCTTATCTCA ACGAGGCTAC TATCCTGATT CACCTGATAA AGAGAATCAA GACACTTACT GCATCAAAAC CGAGCTTCAA GGTAACCCGA ATGTTCATTT CTTCGGTGTC TTTGATGGTC ACGGTGTGTT TGGTACGCAG TGTTCGAATT TTGTCAAGGA GAGGGTTGTG GAAATGTTGT CTGAAGACCC AACTCTGCTT GAGGATCCTG AGAAAGCTTA CAAGTCTGCT TTTTTAAGGG TTAATGAGGA GTTACATGAT AGTGAAATCG ATGATTCGAT GAGTGGTACT ACTGCCATTA CGGTTCTTGT TGTTGGGGAT AAGATTTATG TTGCCAATGT AGGGGATTCG AGGGCGGTTC TTGCTGTTAA AGACAGGAAT CGGATTCTGG CAGAGGATTT GTCTTATGAT CAGACGCCTT TTAGGAAAGA TGAATGCGAG AGGGTTAAAG CTTGTGGTGC TAGAGTGCTG AGTGTGGATC AAGTGGAAGG ACTGAAAGAT CCAAATATAC AAACATGGGC AAACGAAGAG AGCGAAGGAG GTGATCCGCC GAGACTTTGG GTACAAAACG GGATGTATCC GGGAACCGCA TTTACAAGGA GTGTTGGAGA TTTTACAGCT GAGAGCATTG GAGTTACTGC AGAACCAGAA GTGTCAATGG TTCATCTTTC GCCTAACCAT TTGTTCTTTG TTGTTGCAAG CGATGGGATT TTCGAGTTTC TTCCAAGCCA AGCTGTTGTT GATATGGTGG GGAGATACGC TGATCCGCGC GATGGATGCG CTGCAGCTGC AGCGGAATCA TACAAACTGT GGTTGGAGCA TGAGAATAGG ACAGATGATA TCACAATTAT CATTGTACAG ATTAAAAAGC TGTCTAATGA ATGATTCATA TTCCTATTTG CCCCTTTGTT TGATTCTTCT GTACTGTATG TCACAGATTC CATCCAACTA TATAGCAAAG TTAAAAGTAA TGCTCTCTCT TTTGTGTATG AGCTTCTTTT ACCAAAGATT AAATGACGTG TTTACTACG 
Length1809
Protein Sequence
Protein Residue
A.thaliana
AGI-codeAT3G06270.1
DescriptionProtein phosphatase 2C family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
12.8062 Ahg478163 RNA-binding KH domain-containing protein
21.9089 Ahg912787 Transcriptional coactivator/pterin dehydratase
22.1133 Ahg471669 RNA-dependent RNA polymerase 1
29.1719 Ahg485083 FTSH protease 7
30.5287 Ahg897242 Protein of unknown function (DUF626)
32.311 Ahg943669 DHHC-type zinc finger family protein
40.1746 Ahg493112 Polyketide cyclase / dehydrase and lipid transport protein
46.9042 Ahg477043 UDP-Glycosyltransferase superfamily protein
51.0294 Ahg948914 Proteasome component (PCI) domain protein
51.5752 Ahg319740 SET domain group 37
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression