| Annotation |
|---|
| Description | jgi|Araly1|478023|fgenesh2_kg.3__724__AT3G07040.1 |
| Sequence |
ATGGCTTCGG CTACTGTTGA TTTTGGGATC GGACGGATTC TTAGTGTCCT GGAAAACGAG ACCTTGTTAC TGTCAGGAGT CCATGGTGAG ATTGATAAAA TGAAGAAGGA GTTGCTGATC ATGAAGTCTT TTCTTGAGGA CACCCATAAA CATGGTGGAA ATGGATCCAT AGCAACAACA ACTCAAATCG AAGACATTCT CGACGAGTTT GGCTATCACA TCCACGGTTA TCGTAGTTGC GCCAAACTTT GGCGTGCGTT TCATTTCCCG AGGTATATGT GGGCGAGGCA CTCAATAGCT CAGAAGCTAG GAGTGGTGAA TGTCATGATT CAATCCATTT CTGATTCCAT GAAAAGGTAC TATCATTCAG AAAACTATCA AGCAGCAATA TTATCGCCTA TTGATGATGG CGATGCAAAG TGGGTGAACA ACATCAGTGA GTCTTCTCTT TTCTTTAGTG AAAATAGTCT TGTAGGGATT GATGCACCCA AGGGAAAGCT CATCGGACGG CTTCTAAGTC CGGAACCTCA GCGGATTGTT GTCGCGGTTG TTGGGATGGG CGGTTCAGGG AAGACTACAC TCTCGGCGAA TATCTTCAAG TCCCAGAGCG TGCGGAGGCA TTTTGAGTGT TACGCTTGGG TTACAATCTC GAAATCTTAT GAGATTGAAG ATGTATTTAG GACCATGATC AAGGAGTTCT ATAAAGAAGC AGAAACACAG ATTCCAGCTG AATTATACTC CTTAGGCTAC AGAGAGTTGG TGGAAAAACT TGTGGAGTAT TTGCAGTCAA AGAGGTACAT TGTTGTGCTT GATGATGTAT GGACCACTGG TCTATGGAGG GAGATAAGTA TTGCTCTACC AGATGGTATT TACGGAAGTC GTGTTATGAT GACCACTCGG GACATGAACG TGGCTTCTTT CCCATATGGA ATCGGGAGCG GAAAGCATGA GATTGAGCTC TTAAAAGAAG ACGAAGCTTG GGTGCTTTTC TCCAACAAAG CTTTTCCGGG AAGTCTTGAG CAATGCAGAA CGCAGAATTT GGAGCCGATA GCACGGAAAT TACTCGAGAG ATGTCAGGGT TTGCCATTAG CTATTGCTTC TTTGGGGAGC ATGATGTCAA CCAAGAAGTT TGAATCAGAA TGGAAGAAAG TCTACAGTAC TTTGAATTGG GAATTGAACA ACAATCTTGA ACTCAAGATT GTTCGAAGCA TTTTGTTGCT TAGCTTCAAC GATTTACCAT ACCCGCTTAA ACGTTGTTTC TTATATTGTT CTCTTTTCCC TGTGAACTAT CGGATGAAAA GAAAGAGTCT CGTTAGGATG TGGATGGCAC AAAGGTTTGT GGAACCGATC AGAGGAGTGA AAGCAGAAGA AGTGGCTGAT AGTTACCTCA ATGAACTTGT TTACAGAAAC ATGCTTCAAG TTATCTTGTG GAATCCGTCT GGACGACCCA AGGCGTTCAA GATGCATGAC GTGATATGGG AGATTGCTCT ATCTGTATCC AAACTTGAGA GGTTTTGTGA TGTATATAAT GATGACAGTG ATGGTGATGA TGCTGCAGAA ACAATAGAGA ATTATGGTAG TCGCCATCTA TGCATTCAGA AAGAGATGAC ACCAGATAGT ATACGTGCAA CAAACCTTCA CTCTCTGTTG GTTTGCTCTT CTGCTAAACA CAAGATGGAC TTACTTCCAA GTCTGAAACT TCTGAGAGCC TTAGACCTTG AAGACTCTGC CATCAGCAAG TTACCAGATT GTTTAGTAAC TATGTTCAAC CTAAAGTACT TGAATTTGTC GAAGACACAG GTAAAAGAAC TGCCAAAAGA CTTCCATAAA CTCATCAATT TGGAGACATT GAATACAAAG CACTCCAAGA TTGAGGAACT TCCTCCCGGG ATGTGGAAGT TGCAGAAGTT GCGTTATCTC ATTACTTTTC GGCGCAATGA TGGACATGAT TCCAATTGGA ACTATGTTTT AGGTACAAGG GTTGTTCCTA AAATCTGGCA GTTGAAGGAT TTGCAAGTCA TGGACTGCTT CAACGCAGAA GCTGAGCTTA TCAAAAACCT TGGGAATATG ACTCAACTCA CAAGAATAAG TCTTGTCATG GTTAGGAGAG AACATGGAAG AGACTTATGT GATTCACTGA ATAAGATTAG AAGACTTCGG TTCTTATCTT TAACGTCGAT TCATGAAGAG GAACCGTTAG AGATAGATGA CCTGATAGCA ACTGCAAGCA TTGAGAAGCT CTTTCTTGCT GGGAAACTGG AGAGAGTACC AAGTTGGTTC AACACCCTTC AAAACCTTAC CTATTTGGGT TTGCGTGGAT CTCAGTTGCA AGAAAACGCC ATTCTCTCTA TCCAAACGCT TCCTAAATTG GTATGGCTTT CATTTTACAA TGCATACATG GGGCCTAGGT TGTGTTTTGC ACAGGGATTT CAAAATCTGA AGATTCTAGA GATAGTTCAG ATGAAACATC TGACAGAAGT TGTTATAGAA GATGGTGCAA TGTTTGAGCT TCAGAAGCTT TATATCAGGG CTTGTAGAGG GTTAGAGTCG GTACCGAAAG GAATTGAGAA TCTAATAAAT CTTCAAGAAC TGCATTTGAT TCATGTTTCT AATCAGTTGG TGGAGGGGAT TAGCGGAGAT GGAAGTGTAG ACCGGTCAAG GGTTAAACAC ATTCCTGCGA TTAAGCATTA TTTCAGAACT GATAATGGCT CTTTCTATGT GAGCCTCTCA TCTTGAGTGG CCAAGGCATG CTTCATCATA CAAGATACTG CACATTGCAC TGTGAAAATT ACTAAACGTC ATGAGTTTAC CAAACAG |
| Length | 2817 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 2779028.. 2781839 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G07040.1 |
| Description | NB-ARC domain-containing disease resistance protein |
| TAIR curator summary | Contains an N-terminal tripartite nucleotide binding site and a C-terminal tandem array of leucine-rich repeats. Confers resistance to Pseudomonas syringae strains that carry the avirulence genes avrB and avrRpm1. |
| Alias | [RPM1][RPS3][RESISTANCE TO P. SYRINGAE PV MACULICOLA 1][RESISTANCE TO PSEUDOMONAS SYRINGAE 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 10.4881 |
Ahg495713 | |
| 20 |
Ahg940069 | NDR1/HIN1-like 3 |
| 30.7896 |
Ahg494325 | disease resistance protein (TIR-NBS-LRR class) family |
| 34.3366 |
Ahg485448 | HOPZ-ACTIVATED RESISTANCE 1 |
| 38.4968 |
Ahg899328 | Protein phosphatase 2C family protein |
| 41.5692 |
Ahg917283 | |
| 52.7541 |
Ahg471812 | wall associated kinase-like 6 |
| 53.5724 |
Ahg477119 | Uncharacterized conserved protein (DUF2358) |
| 55.8928 |
Ahg327685 | |
| 61.1637 |
Ahg930001 | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|