Detail



ID : Ahg478140

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478140|fgenesh2_kg.3__841__AT3G07990.1
Sequence
TTCCAAATCG TGAGGAAATT CAGAGTTCCA TCAGATCTAA CTCTCTTAGA TCTGATTTTC ATGGATTACT CTTTTCTTCT AATCATTCTC CTACTCACAA TCTCTTCTTC ATGTAATGCT TCTTATGTGG AAGAACAATT GAGAGACAGA ATCAGTAAGT TACCTGGACA ACCTAGTAAT GTCGATTTTA GACAGTACTC AGGCTATGTC ACTGTGAATG AAGTACGTGG AAGGGCTTTG TTCTACTGGT TGGTCGAGTC TCCATCGACC CGTGACCCAA AGTTTAGACC TTTGGTTCTG TGGCTCAATG GTGGCCCTGG TTGTTCTTCT GTTGCTTATG GTGCTGCTGA AGAAATTGGA CCTTTTCGTG TTGGTTCTGA TGGCAAGACT CTTCATCCCA AACTTTATGC TTGGAATCAA TTGGCAAACC TGCTATTCTT GGAGTCTCCA GCTGGAGTTG GTTTCTCATA TTCAAACACA ACTTCAGATC TTTACACAAC CGGTGATCAG AGAACAGCTG AAGATTCGTA TAGATTTCTT GTCAACTGGT TTGAGAGGTT TCCACAATAC AAACATAGGG ATTTTTACAT TGTTGGAGAA AGCTATGCAG GTCATTTTGT TCCTCAATTG TCTAAACTTG TCCATGAAAG AAACAAGGGC TTCAAGAACC CGGCTATAAA CCTCAAAGGT TTTATGGTGG GAAATGCTGT TACAGATGAC TATCATGATT ATATAGGAAC ATTTGAATAT TGGTGGAATC ATGGTCTCAT ATCCGATTCA ACGTATCACC AACTAAAGAC CGCGTGCTAC TCAGAATCAT CTCAGCATCC TTCACTGCAG TGTATGGTGG CTCTGAGAAA TGCCGAACTA GAGCAAGGAA ATATCGATCC GTATAGCATT TTCACCAAAC CTTGCAACAG TACTGTAGCA CTTAAGAGCT TCTTAAAGGG TCGCTACCCA TGGATGTCAA GAGCTTATGA TCCTTGTACA GAGAGATATT CGAATGTGTA CTTTAACCGC GCGGACGTTC AGAAGGCTCT CCACGCAAAC GTCACTCGCT TACCTTACCC CTGGAAAGCA TGCAGTGACA TTGTAGGAAG CTATTGGGAA GATTCTCCTC TGTCTATGCT TCCTATATAC AGAGAATTGA TTACTGCAGG TCTCAAAATA TGGATCTTCA GTGGGGATAC AGATGCGGTT GTTCCTGTAA CTGCTACCCG ATACTCTGTA GATGCACTGA AGCTAGCAAC CATCACGAAC TGGTACCCGT GGTACGACCA TGGCAAGGTA GGTGGGTGGA GTCAAGTTTA CAAAGGACTT ACATTAGTGA CAGTAGCAGG AGCTGGTCAT GAAGTGCCTT TACACCGTCC CCGTCAAGCC TTTATTCTTT TCAGATCCTT TTTAGAGAGC AAACCAATGC CTATGACCTG AGATCAAACC TTGAATGGAC CACTTCTCTG AATTCCTATT CTTTCTTCTT CATCATCAAT AAACCAAGTG TTTCTTCATT CACTGTCTTC CTCAATCCTC AGTGCATCCA AACTCAACAC ACGACTTAAA TTATCTGTCT AGTACAAATC ATAAGCCACT CTTCATTTTT TTTGGGTAAA ATCTTTGTCT CAAACAGTTT TTCTATCTTT TCTCCATTAT TGTATCATTG TATGATACAA AGCAAAGTCT TTCACACTAC AAATCATAAT ACTATATGAT AGTTTAT 
Length1717
Protein Sequence
Protein Residue
Map Locationscaffold_3: 3138248.. 3140704
Download Sequence
A.thaliana
AGI-codeAT3G07990.1
Descriptionserine carboxypeptidase-like 27
TAIR curator summary
Alias[SCPL27][serine carboxypeptidase-like 27]
Gene coexpression
MR
MR Locus Description
10.0995 Ahg481737 Plant protein of unknown function (DUF868)
15.4272 Ahg478021 Pectin lyase-like superfamily protein
16.7033 Ahg480010 RING/U-box superfamily protein
54.4794 Ahg472419 Plant protein of unknown function (DUF869)
71.0422 Ahg929307 Tetratricopeptide repeat (TPR)-like superfamily protein
75.921 Ahg474258 ABC-2 type transporter family protein
82.7043 Ahg488793 Heavy metal transport/detoxification superfamily protein
84.4985 Ahg479245 Leucine-rich repeat (LRR) family protein
86.8332 Ahg946681 ribosomal protein S19
93.3702 Ahg478633 DNA glycosylase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression