Detail



ID : Ahg478299

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478299|fgenesh2_kg.3__1000__AT3G09770.1
Sequence
CTTTGGGAAC ATAAACACCA TCGAAAAGGG TGGTCTTTAT GTTCATGAGT GGAGCTTCTT GGCCAACCGA CCCCATCATC ATCATCTCAT TACCCACTTT CTTCCCCTAA ATTATTCTCT CTTATCTCTC TCTCTTTTTT TTTATTCTTT CTTTCTTAAT TCATCAAAAA TCTCTCTGCT TTTTATTAAT CCCCGGATCT CCGATCCACC CACAAACTTA GAAATTTTCT GAGATTTGAT CATTTGGGTC ACCAAAAGAT CTTGTCTTTT GATTTGGGTT TAACGCCAAT AATCATATGG GAAACATTAG CAGCAGCGGC GGTGAAGGTA GACGCCGTCG ACGGCGAAAC CATACGGCGG CTCCACCACC TCCTCCTCCT CCTTCTTCTT CTCTTCCTCC ACCACCTCCA GCTACAGAAA TCCAAGCTAA TCCCATCGTT TTCGCCGCCG TTACTCCGTA TCCAAATCCT AATCCTAATC CGGTTTACCA GTACCCTGCT TCTTACATCC ACCATCCTCC GCCGGGAACC ATGTCGGGTC CGCCTCTTCC GGCGTACGAC CACCACCTCC ATCATCCTTA CCACAACCAC TCTTGGGCCC CCGTGGCGAT GGCCAGATAC CCTTATGCTG GTCACTTGAT GGCTCCCCCG ACTCCTTACG TTGAACACCA GAAAGCCGTC ACGATTCGTA ACGACGTTAA TCTTAAGAAA GAGACCCTCA GGCTTGAACC CGACCCGGAT AATCCGGGTC GCTTTCTCGT CTCCTTCACG TTTGATGCAA CCGTCTCCGG AAGGATTAGT GTCATTTTCT TTGCTAAAGA ATCCGAAGAT TGCAATCTCA CAGCGACAAA GGAAGATATT CTGCCACCAA TCACCCTAGA TTTCGAGAAA GGACTTGGTC AGAAGTTTAA ACAATCATCT GGTTCTGGTA TAGACTTTTC GGTCTTTGAG GAAGTTGAGC TGTTCGAGGC GGCGAATACA GATATCTATC CATTGGCGGT TAAGGCAGAA GCAGCTCCCT CAGGTGAGAA TGAAGAAGAA AGGTTGGGAT CGAAGAAAAA GAATGCGCAG ATTACTCAAG CGGTTTATGA GAAGGATAAA GGAGAGATTA AGATTAGAGT GGTGAAGCAG ATACTATGGG TTAATGGAAC AAGATATGAG TTGCAGGAGA TTTATGGGAT TGGGAATACC GTTGAGGGCG ATGAGGATTC AGCTGATGAT GCTAATGATC CGGGAAAAGA ATGTGTGATA TGCTTGTCTG AACCACGAGA CACGACTGTT CTTCCATGCC GACATATGTG TATGTGCAGC GGATGCGCTA AGGTATTGAG GTTTCAGACA AATCGATGCC CGATTTGCAG GCAACCTGTC GAAAGGCTTT TGGAGATAAA AGTTCACGGT AATAGCGGAA GTGGGAATAA CACCGGACAG GGTGAAACAG TTGAACAAGA GTAGCCAAAC ACGGCCGAGT ATGGATTGAA ATGCCATCTG ATATATTAGT ATATGCATGT TTGATCCTTG TATGTTAACA ACAAAATGTG TGATTGTCAA TTCATAATAT AGAGATTACG AAATCATTTG GA 
Length1582
Protein Sequence
Protein Residue
Map Locationscaffold_3: 3631666.. 3633657
Download Sequence
A.thaliana
AGI-codeAT3G09770.1
DescriptionRING/U-box superfamily protein
TAIR curator summary
Alias[AIRP3][AtAIRP3][LOG2][ABA insensitive RING protein 3][LOSS OF GDU 2]
Gene coexpression
MR
MR Locus Description
10.3923 Ahg496203 Galactose oxidase/kelch repeat superfamily protein
20.8087 Ahg473395 Transcription elongation factor (TFIIS) family protein
33.1059 Ahg483774 BTB/POZ/Kelch-associated protein
39.6863 Ahg936236
40.5463 Ahg483249 ATP-binding cassette A1
43.4741 Ahg944394 Basic-leucine zipper (bZIP) transcription factor family protein
46.744 Ahg495912 SNARE-like superfamily protein
47.4974 Ahg909539
48.2183 Ahg328336 RING/U-box superfamily protein
49.7494 Ahg493462 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression