Detail



ID : Ahg478400

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478400|fgenesh2_kg.3__1101__AT3G10660.1
Sequence
ATGGGTAATG CTTGCGTTGG ACCAAACATT TCTGGAAATG GTTTCTTACA AACTGTTACG GCTGCAATGT GGCGGCCACG GATCGGAGTT GAGCAAGCTT CTTCTTCTTC TTCCCATAAT GGACAAGTTG CTAAAGAAGC AGCTTCAGAA CCAGCACCTG ATCAAGTCCA GAATAAACCC CCTGAGCCTA TCACAATGCC AAATGCAAGG ACCAATCCCG AAACCAAACC GAAACCCGAT CTAGAGATCC AACCTGAGCA GAAAGTTCTT CCTGAAGAAA TCAAGCCGAA AGTTCTTCCT GAAGAAAGTA AGCAGGAAGT TCTTCCTGAA GAGAGCAAGC GGGAAGTTGT TGTGCAGCCG GAGACAGCAA AACCAGAAAC AAAGTCTGAA TCCAAGCCAG AGACAATAAA ACCAGAAACA ACGTCTGAAA CCAAGCCGGA GACGAAACCT GAACCTCAGA AGCCTAAACA TATGAGGAGA GTGTCCAGTG CAGGGCTTAG AACTGAGTCA GTGTTGCAGA GGAAAACTGA AAACTTTAAA GAGTTCTATT CATTGGGAAG GAAACTTGGA CAAGGCCAAT TTGGGACGAC GTTTTTATGC CTTGAGAAAG GTACGGGGAA TGAGTATGCG TGCAAGTCGA TTTCCAAGAG GAAGCTTTTG ACTGATGAGG ACGTTGAAGA TGTGAGAAGG GAGATTCAGA TAATGCATCA CTTGGCTGGT CATCCAAATG TTATATCTAT AAAAGGCGCT TATGAGGATG TTGTTGCGGT ACACCTTGTG ATGGAGTTGT GTTCGGGTGG CGAGCTTTTT GATAGAATTA TTCAACGTGG ACATTACACT GAGAGGAAAG CTGCTGAGCT TGCGAGAACC ATTGTTGGGG TTTTAGAGGC TTGTCACTCT CTTGGTGTTA TGCATCGAGA CCTCAAGCCC GAGAATTTTC TATTTGTTAG TAAAGAGGAA GATTCCCTCT TGAAAACGAT CGACTTTGGA CTCTCAATGT TCTTTAAGCC AGATGAGGTT TTTACAGATG TTGTTGGTAG TCCGTATTAT GTAGCTCCAG AAGTTCTTAG AAAGCGTTAT GGTCCTGAAT CAGATGTGTG GAGTGCTGGT GTGATTGTTT ACATTTTGTT AAGCGGAGTT CCTCCTTTCT GGGCCGAAAC CGAACAAGGT ATTTTCGAGC AGGTCCTTCA TGGAGATCTT GACTTTTCAT CTGATCCATG GCCAAGCATC TCTGAAAGCG CAAAAGACTT GGTGAGGAAA ATGCTTGTTC GGGACCCCAA GCGAAGACTA ACCGCACATC AAGTGTTATG TCATCCATGG GTACAGATTG ACGGTGTGGC TCCAGATAAA CCTCTGGACT CTGCTGTTCT GAGCCGTATG AAGCAATTTT CTGCAATGAA CAAGTTCAAG AAAATGGCTC TTAGAGTCAT AGCTGAGAGC TTATCCGAAG AAGAAATAGC CGGTTTAAAA GAAATGTTCA AGATGATTGA CGCAGACAAC AGTGGTCAGA TAACTTTTGA AGAACTGAAA GCAGGACTAA AACGAGTTGG TGCCAATCTC AAAGAGTCAG AAATTCTTGA TCTAATGCAA GCTGCTGATG TAGACAATAG CGGAACGATA GATTACAAAG AGTTCATAGC CGCCACATTG CATTTAAACA AAATAGAGAG AGAGGACCAT TTGTTCGCGG CCTTCTCCTA CTTTGACAAG GACGAGAGCG GCTTCATCAC CCCAGATGAG CTTCAACAAG CTTGCGAGGA GTTTGGTGTT GAAGATGCCC GCATAGAAGA AATGATGCGC GATGTTGATC AAGACAAGGA TGGGCGAATA GACTACAACG AGTTTGTGGT AATGATGCAG AAAGGGAGCA TAATGGGAGG ACCTGTGAAA ATGGGTTTAG AGAACAGCAT TAGCATTTCT CTGAAACATT AGTTTTCAGA TTACAAACCC AAAATGATGA TCATGATTGT GTTTTCCTCA ACATTTTGAT GAGATTTTTT GTCGTTAGAC TGGTTTAGGT AAATCTGTTT CTGTACTATG TACTTTTATG CATATACACA TAGTTTTTGT CTGTAACTTT TGGTCATAA 
Length2089
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4017306.. 4020270
Download Sequence
A.thaliana
AGI-codeAT3G10660.1
Descriptioncalmodulin-domain protein kinase cdpk isoform 2
TAIR curator summarypredicted to encode calcium-dependent protein kinase and is localized to the ER. Protein is myristoylated in a cell-free extract. Changing the proposed myristoylated site, G residue in the amino terminal, to A prevented the meristoylation . The G to A mutation decreased AtCPK2 membrane association by approximately 50%.
Alias[ATCPK2][CPK2][calmodulin-domain protein kinase cdpk isoform 2]
Gene coexpression
MR
MR Locus Description
20.7123 Ahg472990 DEAD/DEAH box RNA helicase family protein
32.4346 Ahg480544 GLN phosphoribosyl pyrophosphate amidotransferase 1
42.9884 Ahg917658 subtilase 4.13
47.3075 Ahg334421
59.3464 Ahg351806 Galactose oxidase/kelch repeat superfamily protein
72.581 Ahg474126 Xanthine/uracil permease family protein
73.2393 Ahg932829
77.1492 Ahg476906 beta-galactosidase 16
77.666 Ahg470832 RNAligase
86.9483 Ahg496475
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression