Detail



ID : Ahg351806

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|351806|fgenesh1_pg.C_scaffold_6002399
Sequence
ATGATTAGCT CGTTGTGGAT TTTTGTTTGG CTCTTCGTTG TGTTGGTGCC ATTTTTGAAA CGGGCTTATT TCAAGAACTC AGTGGCCTTA CTTTACACAA CGTTCTCTAG AAAGGAAGAG ACGCTGACGT TTTTGTCGTT GCTCCCTGAT GAAATCGTCT TGAACTGTTT AGCCCGCATA TCGAGATCAT ACTATGCGAA ACTCTCCCTA GTCTGCAAGA CCTTCCGCAC TCTCCTCATT TCTAATGAGC TCACTGTGGC GAGATTGCAC CTTAAAACCC ATAAAACCTT ATTTCATGTC TGCTTACAGT TTTCCGATAA ACCTTGTTCA TCCTTGTTTG TCCTCTGGAT AAAACCTGGT CAAACCCTAA CCAACCAACT CGAGAAGAAG GAGAGATCTA TCGGAGATAC TCGGTTGGTA CCAATACCTT CTTCCTATTG TTCTACGGTA CCATTTTACA CCATTTCAGT TGGTTCAGAA GTGTACGGAC TCAAACAATA TAATGATCCA TCCTCCATGA TGTGGGTCCG TAATAAGAAG AACTTGTTTT GGCGTAAAGC CCCCAACATG ACTGTAGCTC GAGCGAAAGC CATTGCACGC GTCCACAATG GGAAAATATA TGTAATGGGA GGTTGCAGGG CTGATGAATC CGCGAATTGG GGTGAGGTTT TCGACATAAT GACTCAAACT TGGGAACCTT TACCTGACCC TGGCGCTGAG CTCCGCTTTT CTTCAATTAG AAAAATAGAA GTGTTCCAAG GAAAGCTTTA CGTTAGAAGC AATGAGAAGA AAGACTCTGT TTATGATCCA AAAGAAGGTA TGATTGAAAT AGCTAACTAT GGTGGGAAAC TCTTAATCTT ATGGGACAAG TTTGTGCTTC ATGGTACTTG TCAAGAGAAA GATATTTGGT GTGCCCTGAT TGCGCTTGAA AGACGCGATG GTAGTGATGA AGTTTGGGGA AACATTGACT GGGCTAATAT TGTGTTGACC GTTCCTAACG CATATGTTTT TGTGAATAGT CTAAAAAATA GGGTTTGA 
Length1038
Protein Sequence
Protein Residue
Map Locationscaffold_6: 12834446.. 12835639
Download Sequence
A.thaliana
AGI-codeAT5G28180.1
DescriptionGalactose oxidase/kelch repeat superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.73205 Ahg316416 HCO3- transporter family
2 Ahg494865 Pectin lyase-like superfamily protein
2.82843 Ahg924070 SKU5 similar 12
6.32456 Ahg932542 RNI-like superfamily protein
7.54983 Ahg494667 phosphate transporter 1;6
8.12404 Ahg311362
8.18535 Ahg492806 FAD-binding Berberine family protein
8.7178 Ahg901222 homeobox-3
10.4881 Ahg916047
10.583 Ahg931324
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression