| Annotation |
|---|
| Description | jgi|Araly1|478404|fgenesh2_kg.3__1105__AT3G10700.1 |
| Sequence |
AACTAGACGT GTTACCAAAC ACCACCTTAT TTGGTCATCT TCCTCATTCC ACGGTTACTC CCACATCTCG CACTTCCTCT GTACACTTCT TCGTCTCCAT CCAACCCCAG AACTCCTACG CTGAGAAAAG CTTCGCGACA ATGTCTTGGC CTACGGATTC TGAGTTAATT TCCATAAAGG AAGCAGTGGC TCAGATGAGT GGAAGAGATA AAGGAGAAGT TCGAGTGGTG GTTGCACCTT ATCGTATATG TCCTTTAGGA GCTCACATTG ATCACCAGGG TGGAACTGTA TCAGCTATGA CGATTAATAA AGGGATCCTT CTTGGTTTTG TTCCATCCGG CAATACTCAG GTCCAGTTGC GTTCTGCACA ATTTGAAGGA GAAGTATGTT TCAGAGTAGA TGAAATCCAG CACCCCATAG GCCTAGCAAA CAAGAATGGT GCAAGCACCC CATCTCCATC GAAAGAAAAA AGCATCTGGG GCACTTATGC CAGAGGAGCA GTTTATGCGT TACAGACCAG CAAAAAGAAT CTCAAACAGG GCATTGTTGG TTACCTCAGT GGCTCAAATG GACTAGATAG TTCTGGGCTT AGCTCATCAG CTGCTGTTGG TGTGGCATAC CTGCTCGCTT TAGAGAATGC AAACGAATTG ACTGTATCCC CAACAGAAAA TATCGAATAT GACAGACTTA TTGAGAACGG ATATCTGGGT CTGCGGAATG GAATTTTGGA TCAATCAGCC ATTTTGCTTT CGAGTTATGG GTGTCTAACA TACATGGACT GCAAGACTAT GGACCACGAG CTTGTACAGG CTCCTGAACT GGAGAAACCG TTCAGGATAT TGTTAGCATT CTCAGGTTTG AGGCAGGCAT TGACCACCAA CCCAGGATAT AATCTGCGAG TTTCTGAGTG TCAAGAGGCT GCAAAAGTTC TTTTGACTGC ATCTGGGAAC AGCGAGCTGG AACCTACCTT GTGCAATGTT GAGCATGCGG TCTATGAAGC TCACAAGCAT GAGCTGAAAC CGGTTTTAGC TAAAAGAGCA GAGCATTATT TCTCGGAAAA CATGCGGGTT ATCAAAGGAC GGGAAGCCTG GGCTTCAGGC AATCTTGAAG AATTTGGAAA GCTAATTTCA GCATCCGGCT TGAGTTCCAT TGAGAATTAC GAATGCGGTG CGGAGCCACT AATCCAGCTA TACAAGATTC TTCTGAAGGC TCCTGGTGTA TATGGAGCTC GATTCAGCGG TGCAGGCTTT AGGGGATGTT GTCTAGCCTT TGTAGATGCA GAAAAAGCTG AGGCAGCTGC TTCATATGTG AAGGATGAAT ATGAAAAGGC CCAACCCGAG TTTGCTAAGA ATCTGAATGG AGGAAAACCT GTTCTCATCT GTGAAGCAGG TGATGCTGCT CGTGTTCTTC TCTGATCAAT CCCGGAGTTT TTTTTTGCCC CTTATATCTC TCATGCTTAT CGATTCTT |
| Length | 1468 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 4033710.. 4038050 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G10700.1 |
| Description | galacturonic acid kinase |
| TAIR curator summary | Encodes a GHMP kinase family protein that acts as a galacturonic acid-1-phosphate kinase that catalyzes the production of galacturonic acid-1-phosphate. This is a precursor of the important cell wall building block UDP-galacturonic acid. Based on gene trap line GT8007, the gene appears to be expressed in a petal and stamen-specific manner, between flower stages 8 to 11, however, later RT-qPCR analysis demonstrates that the transcript is present throughout the plant in all tissues tested. |
| Alias | [GalAK][galacturonic acid kinase] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 30.3645 |
Ahg480193 | O-Glycosyl hydrolases family 17 protein |
| 40.1497 |
Ahg493420 | TESMIN/TSO1-like CXC 2 |
| 44.3621 |
Ahg472662 | MLP-like protein 423 |
| 51.2348 |
Ahg486566 | FASCICLIN-like arabinogalactan-protein 10 |
| 64.9615 |
Ahg927503 | Leucine-rich repeat (LRR) family protein |
| 79.2969 |
Ahg485285 | IQ-domain 21 |
| 80.2745 |
Ahg480563 | plasma membrane intrinsic protein 2;8 |
| 83.3667 |
Ahg491000 | beta-galactosidase 3 |
| 84.4985 |
Ahg480375 | arabinogalactan protein 9 |
| 91.2579 |
Ahg941617 | germin 3 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|