Detail



ID : Ahg478496

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478496|fgenesh2_kg.3__1197__AT3G11550.1
Sequence
AAAATGAAAA ACGAATCTAC CACCATTGAT GTCCCTGCAG AATCCAGCTC AGCTATGAAA GGCAAAGCTC CTCTAATCGG TGTGGCTAGA GACCATACCA CTAGTGGCTC AGGTGGATAC AACAGAGGTC TCTCCATCTT CGACTTCCTC CTCCGTCTAG CTGCCATTGT TGCAGCTTTA GCCGCTGCTG CAACTATGGG AACAAGCGAC GAGACTCTTC CATTCTTCAC ACAGTTCTTA CAGTTCGAAG CTAGCTACGA TGATCTACCA ACTTTCCAGT TCTTTGTGAT TGCCATGGCC CTAGTAGGAG GATATCTCGT TCTGTCTCTT CCAATCTCCG TCGTGACAAT CCTTCGCCCT CTAGCCACCG CCCCAAGATT ACTCTTGCTC GTTCTTGACA CTGCGGTTCT GGCTTTGAAC ACGGCGGCTG CATCATCGGC AGCAGCAATA TCGTATCTAG CGCACAGTGG AAACCAGAAC ACGAACTGGC TCCCCATTTG CCAACAGTTT GGGGACTTCT GTCAGAAATC CAGTGGAGCT GTTGTCTCTG CCTTTATCTC CGTCGTATTC TTCACCATCC TCGTTGTCAT CTCCGGCGTC GCTCTAAAAA GACACTAATC AAAAACCTTA TATACATGTG TGCTCATCAT TATTGTAAAT TACTCATCCT TTTAAAAGGA AAATGAAAGT GTGATTGTAG CTCTGCTTTT 
Length710
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4363473.. 4364421
Download Sequence
A.thaliana
AGI-codeAT3G11550.1
DescriptionUncharacterised protein family (UPF0497)
TAIR curator summary
Alias[CASP2][Casparian strip membrane domain protein 2]
Gene coexpression
MR
MR Locus Description
2.44949 Ahg951181
2.64575 Ahg946652
6.32456 Ahg917207
6.63325 Ahg952264 Acyl-CoA N-acyltransferases (NAT) superfamily protein
10.0995 Ahg911872
10.0995 Ahg917027
10.0995 Ahg888236
10.0995 Ahg917745
10.4881 Ahg937175 TCP domain protein 16
12 Ahg891098
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression