Detail



ID : Ahg478517

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478517|fgenesh2_kg.3__1218__AT3G11720.1
Sequence
TATTCCCAAG AAAATGAGAG AAAGTATCTT CTAATCGGGA AAGACATCTC CACGTTCTTT GCCCGCCTCG TAGGTTACGC ATCAGCAGCT GGGTTTTGTC TGGCAAAGCT AAAACCAAAA GCTTCCTTTC TTATAAATTG CCGTACGTTT TAAGGTGTTC TCTGATTCAA TTGAGTATGG AGAAGAATCG AGAGGTTTCG GAGTACAGAG AGAGACTTAA TGAGACCTTG TCGTCTCCTG AGCTCGTTAA TGAGCAAACT CTTAAAACTC TAGTCAGAAA ACAGCTCAAT GAAGAGTGTA GTGTTGATAT ATTGGATCAA AGAGTAGCTG CTTTATCCAG TACAATTGAG AAGCTTAGGA GTGTATCAAC AAAGGATCAC GACTCGTCTA AATCAAACAA CGAGGCATCT TATGGTGATT GGAAAGTGAA ACATGATGAT GAAGATTGTC GTGTTATGTA CCGTGAAGGA CTTAAAGGAA GTCCATTTCA TACATTGCTA GTTGAAGGCT GCATTGATGG GACTATTGAA GACTGTTTAT GTGTATGCTG GGAATCATCA TTGTATGAGA AATGGTGGCC AAAGTTGACA TTTCCGTCAT TCAGAGTCTT AGAAGCTAAA TGCTTGCAAA ATTTTAGGAT TGATGAACAG ATATGTTTAC TAAGGGTGAA AGCACCGTGG CCATTGACAG ACAGAGAAGC TATTCTGCAG TATTTCTTAT TCGAATACTT TAAAGACGGT TTAGTCATCA TCCTACTAAA CTCGGTAAAA GAGAGCGACG GTATAGCTGA AGTAGTGAAT GCTGTGAGAA TTGACTTCGT AGGCGGAGTT GCGATACAAA AAGTGACTCC GGAGAGGAGT TACCTAAGAT TTATAGCGGA AGTGGACATA AAGCTGGACT TGGTACCTCC ATCTCTTATT AATTTTATGT CTAGGCAGCT TCTTGGCAAC GGTTTCAAAC TTTTCAAGAA GACTATTGGT TCAGTGGCTG AATCCGATGA TTACAAGAGA GTTTTAGCTG ATCCATTGTA TACTCATATA CATGAAGCTC TGTATTCTAG TGATAAAACT AATGAAATCT GCCAAGTAAA TGAGCTTCAT AGCCAACAAG GAAGAGATTG TGAAGAACAA GAACCGCAGT TGGAAGCTGA TGACCCATAT ATGGCAAAAG AGAATGAGAC TCGCCATTGC GAAAATGAAT CTGTACCTAG CAAAAGAGAT GTTCCTGAGA TCGAGGAAGA AGAATGTGCT GATCTGAAAG AAGAAGAAAA AAGTTCTCTT TCTTCTTTTT CTTCTTCTTC TTCTTCAGAG GAGGATGAAA ACAAGAAAGT CAAAACACGT TTCTGCATAA GTCCAGAGGT GAAGCAAGCT TTAGGGACAT TAGAGAGAGT AATATCAATG GTTAGAAAAT CCAAAACAGA TAATAATAAT ACATCAACCT CTTCCGGTGA AGAAGAAGAA GAAGAAGAAG AAGCATCATC ATCACAAATG CATCATTCAG GGAGCACACA GACTGTTTCT AATAGCAAAG TTTGTATTCA AGATCCTAAA ACTGAACTTC TTGATGAAGC ATCCTTCGCA CATTATCACA ACAACAACAG CAACAAAATA GCTCCTGCAT CACCCGATAT CGATCTAACA ACAAACTCTG AGGTAACAAG AATAACAGTC TCACAAGCCA CAACTCTTTT CAGCCAAACA ACAGAGAATA GTGACGACAA ACCGAGTGGT TTAAACGGAG GTAAGAGCTC AAATCTGCAG AGGAAACGTA ACCCGAGCTG CTTTGGTTTC AGGTTTTGGA GAAGAAGGAC TTGAAATATG CATTGGTAAA TCCAAAGATT TTGTTTCTTT GAAGTTGCAG ATTATATATA TATACAAGGA AACATAGTGT TAAGATTTTG AGAGCAAAGT GTTTCAATAA AAATG 
Length1925
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4435472.. 4438251
Download Sequence
A.thaliana
AGI-codeAT3G11720.3
DescriptionPolyketide cyclase/dehydrase and lipid transport superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
36.7967 Ahg915669 Glutathione S-transferase family protein
47.8121 Ahg483520
57.5152 Ahg491133 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
57.7841 Ahg313855 O-methyltransferase family protein
59.4979 Ahg483895 myb domain protein 2
61.041 Ahg888179
69.2965 Ahg920347
70.2282 Ahg950784 Concanavalin A-like lectin protein kinase family protein
79.5236 Ahg341316 TRAF-like superfamily protein
82.45 Ahg481829 glutamate receptor 2.8
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression