Detail



ID : Ahg478533

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478533|fgenesh2_kg.3__1234__AT3G11890.1
Sequence
GAAAGTCATC GTCACTCCCA GAAAGAAAGA AACTTGTGAT AAAGGTTATA ATGGCGAAGC TAAGGCCTAG ACAGTTGGAA CTGAGCAAGA CTGTTCCTTC CAAGTTAGGT TTTGATGGAG AAGAAGACGC TTGGGTCTTT GTTAAAAAGC AGAGAATCAT CATTGTTTTG CCTTCTCTTC CACTACCTGA ACAACATCTC ACTATGGAGA AACCTGCAAT AACTTCTCAA TTAGAAGCTG AGTTAAGAGA AAGCATGGAG GATACGCAAG AAAGTACTTT TCTTCACACT GTGGTACCTG CTCTTCCTCT GCCTGAACAT TTCATTATGC ACAAGCCTGA AAATTCTGAG TCTCAAGCTG AGTTAAGAGA CGTTCTTGCG GATACGCACA AAACTACTAC TCCTGTTCCC ACTGTGGTGG TACCTACTCC TCTTCAAACT GGGATGTCTC CTCTTCTATT ACCTGAACAC TTCGTTTTGC AGAAGCCTGC AACTTCTCAA TCACAAGCGG ATACGCACGA AACTACTCTT CTTCAGACAG TGATACCTTC TCCCCCTGTA CCTGACCATT ACAGTCTGCA GAAGCCTGCA GCTTCTATAT CACAATCTGA GTTAAGAATG GAGATAAGCA AAGCTACTCT TGAGCCTACA ACTTCTAAAT CACAAGCTGA GTTAAGAACG GAAACACACA AAGCTATTCT TGTTCACACA GTGATGCCTT CTCTTCCTGT ACCTGAACAT TACACGATGC CTTCTCTTCC TGTACCTGAA CATTATAGTA TACAGAAGCC TTCAACTTCT CAATCACAAG CTGAGTTAAG AGCGGATACG CGCAAAGCTA CTCTTGTTCA CACAGTGGTG CCTTCCCTTC CTGTAACTGA ACATTGCACT TTGCAGAAGC CTGCAACTTC TCAATCACAA GCTGAGCTGA GAGACCTGGT TGCGGATACA CACGAAGCTA GTCGTGTTCA CACTGTGGAA CCTGAGGCTT ATCCTGATTT CACCTCAGTA GACAAACCGG AGATAGTTAT GAGTCGCAGT CTCACAACCA GGAAAGCTCC AGCACCAAAG AGATCACTTC AAGATTGTAG AATGAATCAG GATAGAAGAG TGGAGGTTCA CAGGAGACGT GCGGGTCACA AGCCCATAAG GTTTCCTAGA GTGATGTGCA GCTCTGTAGT TATTGATAAT GAGAAGCTGA GAGTGTTGAA TCTAGAGAAG AAGGTTGAGA AAGCGGGTGG GTTGCACGAA TGGGTTGGAT CTATAGGATT AGGGAGAGAG TTTGAGAGGA TGTTGAGAGG ACAGAAGATG AGTAAGTTTC AGATGGCGAA TTTGACCATG GAGAAGCTTA AGCAGATGGG TGCTTTAGCC GTTGGGCCAA GAAGAAAGCT TATACATGCA ATTGGTTGTG TCTATCACCC ACATTGTCTA CGTACTTCCT TTAACTGACA ACTATCTATG AAAGTTTAGT T 
Length1471
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4486209.. 4487766
Download Sequence
A.thaliana
AGI-codeAT3G11890.2
DescriptionSterile alpha motif (SAM) domain-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
15.4919 Ahg894754 TRAF-like family protein
32.7719 Virus0878
34.3366 Ahg909064
53.7122 Virus0327
59.1861 Ahg940783
61.9193 Ahg328326 Cyclase family protein
75.0333 Ahg945478 Protein of unknown function (DUF630 and DUF632)
79.196 Ahg939586 cellulose synthase-like D5
95.4987 Virus2095
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression