Detail



ID : Ahg478549

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478549|fgenesh2_kg.3__1250__AT3G11980.1
Sequence
ATTCTGTTCT TGGTTTACTT AATCTTCTTT CTAGTTAAGT ATATTCTTGT TGCTCATCAC CAAAGCTTGT GATGGAGGCT CTCTTCTTGA GTTCTTCTTC TTCTTCCTCC ATCGTTGCAT CAAACAAACT TGCTAGATTA CACAACCGTT GTGACTGGTC TACATTGGTT AGAGATAAGA AAAGGGTCGG TCCCACTTGG TGCCGTGTAG GTGGTGGTGA TGGTGGGAGA AACAGTAACG CAGAGAGACC TATTCGGGTT TCTTCGCTTT TGAAAGACAG AGGTCAGGTA CTGATTAGGG AACAGAGTTC GCCGGCTATG GATGCTGAGA CATTGGTTCT GTCTCCAAAC GGGAATGGGA GAACCATTGA GATCAATGGA GTAAAGACTT TGATGCCTTT TAGTGGTGCT GCTATGGTTG GTATGAAAGA AGGACTTGGC ATAATCAGTT TCCTCCAAGG GAAGAAGTTT CTAATCACTG GCTCGACCGG TTTCTTAGCT AAAGTACTGA TTGAGAAAGT CTTGAGAATG GCTCCTGATG TTAGCAAGAT ATATCTCTTG ATTAAAGCTA AAAACAAAGA AGCTGCCATC GAGCGGTTAA AGAACGAGGT GTTAGATGCA GAGCTTTTTA ATAGTCTAAA AGAGACTCAT GGAGCATCGT ACATGTCATT CATGTTAACT AAACTCATCC CTGTGACCGG AAACATTTGC GATTCAGACA TTGGTTTGCA AGCAGATTCA GCTGAGGAGA TTGCTAAAGA AGTTGATGTG ATTATCAATT CTGCTGCTAA TACAACCTTC AATGAAAGAT ACGATGTTTC TCTGGACATA AACACAAGAG GGCCCGGTAA TCTCATGGGA TTCGCCAAGA AGTGCAAGAA GCTCAAGCTG TTCTTGCAAG TATCCACAGC TTATGTGAAT GGACAAAGAC AAGGAAGGAT CATGGAGATG CCATTCTCGA TGGGAGATTG TATAGCAACC GAGAACTTCC TCGAAGGAAA CAGAAAAGCA TTAGATGTTG ATAGAGAGAT GAAGTTAGCT CTTGAAGCTG CTAGAAAAGG GACTCAAAAT CAAGATGAGG CGCAGAAGAT GAAGGATCTC GGTCTAGAGA GGGCAAGATC ATATGGATGG CAAGACACTT ATGTTTTCAC GAAAGCAATG GGTGAAATGA TGATCAATAG CACTAGAGGA GACGTACCTG TTGTTATTAT AAGGCCCAGC GTCATCGAAA GCACGTACAA AGACCCTTTC CCTGGATGGA TGGAAGGAAA CAGGATGATG GATCCTATAG TTCTATGTTA CGGGAAGGGA CAGCTCACGG GGTTTCTGGT TGATCCAAAA GGAGTTCTTG ATGTGGTTCC TGCTGATATG GTTGTTAATG CAACATTAGC TGCTATAGCA AAGCATGGAA TGGCAATGTC AGATCCGGAA CCTGAAATAA ATGTGTATCA GATCGCTTCT TCGGCGATAA ACCCGCTGGT TTTCGAAGAC TTAGCGGAGC TTCTTTATAA CCACTACAAG TCATCCCCGT GCATGGACTC TAAAGGTGAT CCAATTATGG TGCGTTTGAT GAAACTTTTC AATTCAGTTG ACGATTTCTC GGATCATTTG TGGAGAGATG CTCAAGAACG GAGCGGGTTG ATGAGTGGTA TGAGCTCAGT GGATAATAAG ATGATGCAGA AGCTAAAGTT TATATGCAAG AAATCTGTTG AACAAGCCAA ACACCTTGCT ACTATTTATG AGCCATACAC TTTCTATGGT GGAAGATTTG ACAACAGCAA TACACAGAGA TTAATGGAGA AGATGTCAGA GGACGAGAAG AGAGAGTTTG GGTTTGATGT TGGAAGCATT AACTGGACGG ACTACATTAC AAATGTTCAC ATTCCCGGTT TAAGAAGGCA TGTCTTGAAA GGAAGAGCTT AAAATTCAAA TCTCACTTAA CCAGACCAAA CAAAATCAAT CCTTTCTTTC ATCTTTTTTT TTTTTTTTTT TTTCATTCCA TGTAATCGTG TTGTGTCTAA TATATCAGTT TGATTTGTAA TAATTTGAAG AGAAAAGGGA GTGTTGTTAT CTTCAAGTTT GCCCAAAATC TTTAGTCATG TTCGATCCAA GAC 
Length2113
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4572477.. 4575340
Download Sequence
A.thaliana
AGI-codeAT3G11980.1
DescriptionJojoba acyl CoA reductase-related male sterility protein
TAIR curator summarySimilar to fatty acid reductases.
Alias[FAR2][MS2][FATTY ACID REDUCTASE 2][MALE STERILITY 2]
Gene coexpression
MR
MR Locus Description
5.2915 Ahg316947 Pectin lyase-like superfamily protein
5.65685 Ahg931789
5.83095 Ahg351609 Protein of Unknown Function (DUF239)
6.32456 Ahg949205 transposable element gene
8.48528 Ahg484914 transposable element gene
9 Ahg470876 Cation/hydrogen exchanger family protein
10.4881 Ahg490964 RmlC-like cupins superfamily protein
10.8167 Ahg925156
12.1244 Ahg948378 PYR1-like 12
12.9615 Ahg337040
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression