Detail



ID : Ahg478567

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478567|fgenesh2_kg.3__1268__AT3G12110.1
Sequence
TTCTCTTCTT CATTCGCTCC GTTTCTCTCT CAAACACCCT CCAGGTTTCC TCAGAGATCC CTCGAATCAT TTTGAAGGAT ATAGAAAATG GCAGACGGTG AAGACATTCA GCCTCTTGTC TGTGACAATG GAACCGGAAT GGTTAAGGCT GGATTTGCCG GAGATGATGC ACCAAGAGCT GTATTCCCTA GCATTGTTGG TCGTCCTCGT CACACTGGTG TGATGGTTGG TATGGGACAA AAAGATGCTT ACGTTGGTGA TGAGGCTCAG TCTAAGAGAG GTATTTTAAC ATTGAAATAT CCTATTGAGC ATGGTATTGT TAGCAACTGG GATGACATGG AGAAGATTTG GCATCACACT TTCTACAATG AGCTTCGTGT GGCACCTGAG GAGCACCCTG TTCTTCTCAC TGAGGCTCCT CTCAACCCCA AGGCTAATCG TGAGAAAATG ACACAGATTA TGTTTGAAAC TTTCAACACT CCTGCTATGT ATGTCGCTAT CCAAGCTGTT CTTTCCCTCT ACGCCAGTGG TCGTACTACT GGTATTGTGC TCGACTCTGG AGATGGTGTG AGTCACACTG TTCCAATTTA CGAAGGATAT GCTCTTCCAC ACGCCATTCT GCGTTTGGAC CTTGCAGGAC GTGACCTTAC TGATTACCTC ATGAAGATCT TAACAGAGCG TGGTTACTCA TTCACTACCT CAGCAGAGCG TGAAATTGTA AGGGATGTGA AAGAGAAACT TTCTTACATA GCTCTTGACT ACGAGCAAGA GATGGACACG GCAAACACAA GCTCATCCGT TGAGAAGAGT TACGAGTTGC CTGATGGACA GGTGATCACC ATTGGAGGAG AGAGATTCCG CTGCCCCGAG GTTCTGTTCC AACCATCTTT GGTGGGAATG GAAGCTGCTG GTATTCATGA GACCACTTAC AATTCCATCA TGAAGTGTGA TGTGGATATC AGGAAGGATC TGTATGGAAA CATTGTGCTC AGTGGTGGAA CCACCATGTT CCCTGGAATT GCTGATAGGA TGAGCAAAGA GATCACTGCT TTGGCTCCAA GCAGCATGAA GATTAAGGTT GTTGCTCCAC CAGAGAGGAA GTACAGTGTC TGGATTGGAG GCTCCATTCT AGCATCACTC AGTACCTTCC AACAGATGTG GATAGCAAAG GCTGAGTATG ATGAGTCAGG GCCATCAATA GTCCACAGGA AGTGCTTCTA AGATTAAGCT CGAATCAAAG TGATGAATGA TTGTTCTGTA TTGGTAAAGC CTTTTGTTCA TCGACTTTGT TGCAAAATAT TCTTTTGTTT TCTATGTTTC TTCACCAC 
Length1328
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4621119.. 4623040
Download Sequence
A.thaliana
AGI-codeAT3G12110.1
Descriptionactin-11
TAIR curator summaryEncodes an actin that is expressed predominantly during reproductive development.
Alias[ACT11][actin-11]
Gene coexpression
MR
MR Locus Description
9.94987 Ahg489261 SLAC1 homologue 3
15.906 Ahg491877 GDSL-like Lipase/Acylhydrolase superfamily protein
21.9089 Ahg486262 Basic-leucine zipper (bZIP) transcription factor family protein
23.4947 Ahg332502 Major facilitator superfamily protein
24.3721 Ahg494417 GDSL-like Lipase/Acylhydrolase superfamily protein
24.4131 Ahg483330 Basic-leucine zipper (bZIP) transcription factor family protein
33 Ahg478392 cytochrome P450, family 77, subfamily A, polypeptide 6
33.6155 Ahg920333 glyoxal oxidase-related protein
35.1994 Ahg470889 Glycosyltransferase family 29 (sialyltransferase) family protein
37.2961 Ahg946787 HXXXD-type acyl-transferase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression