Detail



ID : Ahg478650

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478650|fgenesh2_kg.3__1351__AT3G12890.1
Sequence
AAATGGCATC ATCTCTTCCT CAGTTCTACG CTGATTTCAC AACATTTTCC GGTGAGACTT CTTCGCAGTT TCACGGCTCT TCTTCATGTC CCGACGTGGA CTCCTCGTTA TCCAGCTACC TTGACGACTG TTATGGCTCC TTCAATACCT CTTCTAATCC AGAATCCATC TTTGTACCCC AAGTTTTTGG TATTTCTGAC GTCTCTGTGC CTGAATACAA CAATTATTAC CAGAAAATGA GTGTGAATAA TGCCACACAA TACTTTCATG GTGGGGATCA TCAAGAATAC TACGCCTTTT CACCGGAGAT CAAGCCCTTG TTCCGTCCGG CCACAGGAGA GCAATCTTGG GGAAATAGTG AAGGAGGGAT ACAGGCTGAG CCAAACACAA AAGTGGGACG CTACTCGGTG GAAGAACGTA AAGACAGAAT CATGAGGTAC TTGAAGAAGA AGAACCAGCG CAACTTCAAT AAGACCATCA AGTATGTGTG TCGTAAAACC CTAGCCGACC GACGTGTTCG TGTTCGCGGC CGATTTGCTA GAAATAATGA CACATGTGAA GAACAATCTC ACATGTCAAA GAATCACAAC AACCATTCTG AAAAAGAGGA AGATATGTTT TCAGGATCAG ACGACTATCT AATCCAGATG GAACACGATG ACGGATGGCT TCACGAAGCA ATGTCTAATC TGATTCCTTT TCCTTGTGAA TTTGACGCTC CTGGAGATGC TCATCATCCA AACACTTGGA GTTTCTGATG TCACTACCCA TCTCATTTAC TTCCGAATCA ATTAATGTCG CTGGCTATTA AATTTTCATC AGTTAGTTTA GTTTTACGTA CCAAGCAGCT TATTTATTTT ATGGTAGATT TATCATATTG TACTTAATTA TTCTTGGGGT TATTGAACAT GAAGATTAAT TCTGTCTAGT GAATAAATAA AAGAACTT 
Length948
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4875003.. 4876246
Download Sequence
A.thaliana
AGI-codeAT3G12890.1
Descriptionactivator of spomin::LUC2
TAIR curator summaryEncodes a protein belonging to a class of CCT (CONSTANS, CONSTANS-like, TOC1) domain proteins. The protein contains a 43 amino acid-long sequence with high homology to the CCT domain but does not have any B-box or GATA-type zinc finger domains. Functions as a transcriptional activator and regulates the expression of at least a subset of sugar-inducible genes.
Alias[ASML2][activator of spomin::LUC2]
Gene coexpression
MR
MR Locus Description
7.4162 Ahg922482 LOB domain-containing protein 32
18.6548 Ahg946682
21.6333 Ahg948578
23.3238 Ahg937718
31.7805 Ahg923548
33.4963 Ahg319913 Protein of unknown function (DUF626)
36.1663 Ahg493318 Thioredoxin superfamily protein
39.7492 Ahg338612
40.6448 Ahg906746
40.694 Ahg930762
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression