Detail



ID : Ahg478769

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478769|fgenesh2_kg.3__1470__AT3G13710.1
Sequence
TCAGACATTG ACCAAACTGA TACAATTTCT AACGCTACAA TATTTTTTTA TAACATCACC CTACATTATT GTAATAGTAT CACAAATTTT CTACATCATC CAATTTATTT TGTTTTATTC CATATGCAAA TTCAAGAGAC CTTCAAAACT ATAAATCAGG ACAGTTTTAC ATTATTTCTA TCTAGTCCTC TGACTAAATA ATGACGAACA ACAACGCGAT TCCGACGTCG TCATCTCCGG CAGTGAATCA CGAGTCTATC TCACGCGCCA AGCAACATAT CAAAGACGGA CTAGCCACGC GCCGCCCCTG GAGAGTGATG TTCGATTTCC ACTCCATGGG ACTACCTCAC GGCGTCTCCG ATGCTTTCAC AAGAACCAAG ACGAATCTTG CTTACTTCCG GAGTAATTAC GCAATCGTAG TCTTGAACGT CATCTTCTTC AGCTTGATTT GGCATCCGAC ATCGCTCATC GTCTTCGCAG GCTTGGTTTT CCTATGGATC TTCCTTTACT TCCTCCGTGA CGAGCCTCTC AAAGTGTTCC GATTTCAGAT CGACGATCGT GCGGTCCTGA TTGGTTTATC GGTTATAACC ATCGTTCTTC TCCTGTTGAC CAACGCGACG TTTAATATTG TTGCGGCGTT GGTGGCCGGA GCTGTGTTGG TTCTGATCCA TGCGGTGGTT AGGAAGACGG AGGATCTTTT CTTGGATGAA GAGGCAGCGA CGACTGAAAC GTCAGGACTG ACGTCACACC CTTCGTCTTA AAACAATCGA TCTCGAATTT TATGTATATT ATATTGTTTT TGATAATCTT GTGTAATAAT TTATAGTGTA AGTTTGGTTT TTTTTGAGTT TTGAAGTTTG AACAAGCTTA ATAATGAATG TTAAAGTCTT CGCCTTTTTT TTGGCGGGCT GCTTACTTTT ATAACTTTTT GTCGACTTAT TGGGCCATTC ATTAAGGCCC AATAAACTCA GCCCATAAAA TTCGAAAAGG AAAGTGTTTA AACAGTGCGT CACACTACCA TTTACACGTC AGCTCTCTTC GCCGGCGTCT ATTGCAACCG TCAACCTCGC CGCCGGCCAG AGAAAAAAAT GGCGTATCAC CAACCGTACG ATCCTTTCTA CGTCTATCAA CCTCATTATC ATCCACATCA TCTTCCGCCG CAGCTGCCAC AGTTCGCCGA CGAACCTGGG GCGATAAACA CTCTCTTTGT CTCTGGTTTG CCTAACGATG TTAAAGCTCG TGAGATCCAC AATCTCTTCC GTCGCCGTCA TGGATTCGAA TCTTGTCAGC TCAAGTACAC TGGACGCGGC GACCAGGTTG TGGCATTTGC AACATTCACG AGTCATAGAT TCGCTATGGC TGCAATGAAT GAGCTAAATG GTGTGAAATT TGATCCTCAA ACAGGATCAA CTCTACATAT AGAACTAGCT AGATCAAACT CTAGAAGAAA AGAAAGGCCA GGAAGTGGGC CTTATGTTGT GATTGATAAC AGAAACAAAG AACTGTCTAA GTCTCAGGAT GACCAGAGTG ATGAAGGGGA TAGCGATCCT GATGAGGCGC AGGAACCTCG AGATAGCGAG TCTCCAAAGG AAAACGATAA TGCCAAAAGC GAAGCGGATT CTGAGCCAGA TAGTAAAGCA ACATCCGCTA ATGGGCACTT AGAGAAAGCA TATGAAGGAG GTTCTGGTGC TCGAGCTTGT TCGACATTGT TTATAGCTAA TCTAGGGCCT AATTGTACAG AAGATGAACT TAAACAACTC CTCTCTAGAT ATTCTGGTTT CAACATCTTA AAGATGCGAG CTAGAGGCGG AATGCCGGTT GCGTTTGCTG ATTTTGAGGA AATCGAGCAA GCTACTGATG CCATGAATGA ACTTCAAGGG CATCTCTTAT CCTCTTCAGA CCGAGGCGGC ATGCATATAG AATATGCAAG ATCAAAGATG AGGAAACAGT AAAGATTAAT GTACCACATG CCAATGGTAT TCTCTTCTGA AAACGAAATA TATAGAGATC ATAAGCAAAT GAAAGCTGTA TTTCTTTATT TTAAATCCCC ACTTACTATT TGTTGTCATG AAGATGGATC TTCTATGCTG ACACTGACTT AAGAAATACG TGTTAATATT TTTATTCAAG A 
Length2131
Protein Sequence
Protein Residue
Map Locationscaffold_3: 5308683.. 5311794
Download Sequence
A.thaliana
AGI-codeAT3G13710.1
Descriptionprenylated RAB acceptor 1.F4
TAIR curator summary
Alias[PRA1.F4][prenylated RAB acceptor 1.F4]
Gene coexpression
MR
MR Locus Description
19.4422 Ahg470979 NPK1-related protein kinase 1
20.7364 Ahg923117
32.1559 Ahg946316 Pentatricopeptide repeat (PPR) superfamily protein
47.0106 Ahg910527 Transmembrane amino acid transporter family protein
62.3538 Ahg496587 chromatin remodeling 24
63.4429 Ahg493792 GRAS family transcription factor
68.9348 Ahg330218 AMP-dependent synthetase and ligase family protein
76.7333 Ahg893671 Phototropic-responsive NPH3 family protein
88.3176 Ahg944155
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression