| Annotation |
|---|
| Description | jgi|Araly1|478791|fgenesh2_kg.3__1492__AT3G13870.1 |
| Sequence |
TATTTCTTTT GTCAAATAAG AAGAAGCACT TATGACCTTA CGAGAAGCAG TCGTCAAGGC ACCGGTGCAT CAATAGCGAG CTCGAGCCTA GAGATCTCTG TACCATTCTC TTCTTCATTC ATCACTCTAT CTGCGTTTCG TTGAGAGATA ATGGATGCCG CTTGCTCTAC CCAGCTTATC GATGGAGATG GTGTCTTTAA TGTTTCTGGG GTTGATCATT TCATCAAGGA GGTTAAATTG GAAGAATGTG GTCTTTCATA TGCGGTTGTC TCGATTATGG GTCCACAAAG TAGCGGGAAG AGTACACTCT TGAATCATTT GTTTGGAACC AACTTTAGAG AAATGGATGC ATTTAGAGGA AGGTCTCAGA CAACTAAGGG AATTTGGATT GCTAGATGCG CTGGTATTGA GCCTTGCACC GTTGTGATGG ATTTAGAGGG TACCGATGGG AGAGAGCGTG GTGAGGATGA TACTGCTTTC GAGAAACAGA GTGCTCTTTT TGCACTTGCT GTCTCAGACA TAGTTCTTAT CAACATGTGG TGTCATGATA TTGGTCGGGA ACAAGCAGCA AATAAACCTC TTTTAAAGAC TGTGTTCCAG GTTATGATGC GGTTGTTTAG TCCGCGGAAG ACAACTTTGA TGTTTGTTAT AAGAGATAAA ACACGGACGC CACTGGAAAA TTTAGAACCA GTGCTGAGGG AAGACATTCA AAAGATATGG GATTCAGTCC CCAAGCCTCA GGCACACAAA GAAACTCCAC TTAGTGATTT CTTCAATGTT GAAGTAGTTG CTCTCTCGAG TTATGAAGAA AAGGAAGAAC AGTTCAAAGA GCAGGTCTAT AATTTGAGAC AACGGTTCTT CCAATCTGTT GCACCTGGCG GGCTTGCTGG TGATCGACGA GGAGTTGTCC CTGCCAATGC TTTTGCTTTT AGTGCAAAAC AGATGTGGCA AGTCATTAAA GACAACAAAG ACTTGGATCT TCCAGCACAC AAGGTCATGG TAGCAACTGT GCGATGCGAG GAAATTGCCA ATGAAAAATT CTCTAGTTTT ATCGCGAATG AGAATTGGCG CGAGTTGGAA GAGGCTGTAC AGTCTGGTCC TGTTTCCGGA TTTGGAAGAA AGCTGAACTC AATTCTCCAA TCCAGCTTAT CAGAGTATGA CACAGAAGCT ACATACTTTG AAGAAAGTGT AAGATCATCC AAGAGACAAC AGCTGCAAGA AAAGTTATTG CAACTTGTTC AACCAACTTT CCAAGACGTG CTTGGACATT TGAGATCTGG AGCACTTGAA AACTTCAAGA ATGCTTTTGA GAAGGCCTTG AATGCTGGAG AAGGGTTTTC ATCATCTGCG AAATCCTGCG CTCAGTCATG CATATCTAAG TTTGATAAAG GATGTGAAGA GGCTGTTATT GAACAAGCAA ATTGGGATAC ATCTAAAACT CGGGAAAAGC TTGAGCGTGA TATTGAAGCC CATATCTCTT CTGTCCGTGC TGCAAAGTTG GCTGAACTGA CTACTCTGTA TGAGTCAAAA CTAAATGTAG CATTATCCGG ACCGGTGGAA GCTCTTCTGG ATGGGGCTAA TGATGAAACA TGGCCAGCAA TAAGAAAGCT ACTTAGACGG GAAGGAGAAT TGGCTGTCTA TGGTCTCTCC GACGCATTAT CTGGTTTCGA AATGGACGAA GAAACACGGA GTAAAATGCT TGGTGATCTC GAGAACTATG CACGGGGTAT TGTTGAAACC AAGGCAAAGG AAGAGGCTGG AAGAGTGTTG ATGCGCATGA AGGATAGATT TGCTACAATC TTCAGCCATG ATTCTGATTC AATGCCACGT GTTTGGACTG GAAAGGAGGA CATCAGAGCA ATCACAAAAA TGGCTCGTTC TGCATCCTTG AAGCTGCTGT CTGTTATGGC TATTATACGC TTGGATGATG AACTCGATAA TATTGAGAAG ACATTGACGC TCTCTCTGTT TAATTCTACG GGCAACAATG CTACTAGCAA GAGCATCAGC ACAATTGATT CACTTGCCTC AAGCACTTGG GAGCAGGTTG CACCAGAAAA GACTTTGATC ACGCCTGTGC AGTGTAAATC ACTGTGGAGG CAATTCAAGA ACGAGACAGA ATATACCGTT ACACAGGCCA TTTCTGCACA GGAAGCTAAC CGACGAAATA ACAACTGGCT GCCACCTCCA TGGGCAATCC TTGCCCTGGT TGTTCTTGGA TTCAATGAAT TTATGACTCT CTTAAGAAAT CCTCTATGGC TCTTAGTTCT TTTTGTGGGA TACCTTATTT CCAAAGCCTT GTGGGTGCAA TTAAATATTT CAGGAGAATT CCGCAACGGC GCGCTACCTG GACTTCTCTC CTTGTCAACC AAATTCATTC CAACGGTCAT GAACCTCCTC AAAAAGCTTG CGGAAGAAGG ACAAGCACCA CCCACAAATA GCAACCAATC AATGAACTCA ACAGCTCAAT CCGAGGTTAC AACCAATGGA GAAAGCAGCA GCAGCAGCAG TAGCTCTGGT TCATCTCCAG CAAAAAACGT ACCCATTGAT ACAAGTGCAT AGAAGGAAGA ACTATACAAG CTTAAGCTGT TGTGCGAGCA CAGGAAGCTA GAAACTTAAA ATTCGTTACC CTTTAAAAAA GGTAGCTCTC AGTTTTGGTG TTGATCAGAG AGATTCACCG AGAGCCATAT GTTTTATGTC TCCGATGGCG ATGGTTCCTC TTGCAGGTGC CAAAGTGATC TTGTATGTTC GTAGACTAAG ATTCTGATGC AGACAAACAA AAAAAACTCA AGATTTATTT GTTTACGAGT TCTGTAGTGA TGTGGTTTAT TGTATCTGAT AAAAGAATAT TACTCGAGGA GAAACCGGTT TTTGATT |
| Length | 2877 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 5401905.. 5407710 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G13870.1 |
| Description | Root hair defective 3 GTP-binding protein (RHD3) |
| TAIR curator summary | required for regulated cell expansion and normal root hair development. Encodes an evolutionarily conserved protein with putative GTP-binding motifs that is implicated in the control of vesicle trafficking between the endoplasmic reticulum and the Golgi compartments. |
| Alias | [GOM8][RHD3][GOLGI MUTANT 8][ROOT HAIR DEFECTIVE 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.4641 |
Ahg482837 | AMP deaminase, putative / myoadenylate deaminase, putative |
| 4.47214 |
Ahg477486 | general regulatory factor 7 |
| 4.69042 |
Ahg488386 | U-box domain-containing protein |
| 5.65685 |
Ahg930502 | BLISTER |
| 8.12404 |
Ahg482461 | Trimeric LpxA-like enzyme |
| 8.3666 |
Ahg495939 | regulatory particle triple-A ATPase 3 |
| 8.7178 |
Ahg939446 | transducin family protein / WD-40 repeat family protein |
| 9.53939 |
Ahg933950 | NAD(P)-binding Rossmann-fold superfamily protein |
| 10.6771 |
Ahg493647 | yeast YAK1-related gene 1 |
| 10.9545 |
Ahg328593 | N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|