Detail



ID : Ahg478873

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478873|fgenesh2_kg.3__1574__AT3G14550.1
Sequence
TTATAAAGTT CTATTGGAGA CGGTGGACAG GCCATGGCTA CTACTGTTCC TCTCAGCTCA CTCTCCCACT TCATCCAATC CAGAGGAAGA AGAGACAACT CCATATCTTC CGTCAAGAGT CTCCAAAAAC GCACAGGTTT GTCTCTCTCT TCTGCGCTCA CCTCACAAGG TGCCAGAGAC ATGATTCCAC CAGAGGGAAA AAGCGACGAT CGCAACTCTG CCTTTGACTT CAAGTCCTAT ATGATTAATA AAGCCAAATC TGTAAACGCG GCTCTCGACA TTTCAGTACC GCTCCGAGAA CCCCTCACGG TCCAGGAGGC CGTGCGGTAC TCATTGTTGG CGGGTGGAAA ACGTGTGAGG CCTATGCTCT GCATTGCTTC CTGCGAGCTC GTGGGTGGGA ACGAGGCTAC TGCCATGCCA GCCGCTTGCG CAGTCGAGAT GATCCACACA AGCTCTCTTA TTCATGACGA TCTTCCGTGC ATGGACAATG CCGACCTCCG CAGAGGCAAG CCAACCAACC ACAAGGTATT TGGAGAAGAC ATGGCTGTTT TGGCGGGTGA TGCACTCCTT GCTTTAGCGT TTGAGCACAT GACGGTTGTG TCGAGTGGTT TGGTCCCTCC CGAGAGGATG ATTCGCGCGG TGGCTGAGCT GGCCAGGGCC ATAGGGACAA CAGGGCTCGT TGCTGGACAA ATGATAGACC TAGCCAGCGA AAGATTGAAT CCACACGACG CTGGATTGGA GCGTCTAGAG TTCATCCACC TCCACAAAAC AGCGGCATTG TTGGAGGCAG CGGCGGTGTT AGGGGCCATA ATGGGAGGTG GAACAGAGGA AGAGATCGAG AAACTTAGAA AGTATGCGAG ATGTATTGGG CTACTGTTTC AGGTGGTTGA TGATATTCTC GACGTAACGG AATCTACTGA GGAATTGGGT AAGACCGCCG GAAAAGACTT AATGGCCGGA AAGCTGACGT ATCCAAGACT GATAGGTTTG GAGAGATCGA GGGAAGTTGC AGAGAAGCTG AGGAAAGAAG CAGAGGAACA GGTTTTAGGG TTTGATTCCG AAAATTCAGC GCCTCTGGTG GCTCTTGCTA GTTACATTGC TTGCAGACAC AACTGATACT TTTCATGGAC TGATCATATC CTCAATGTTT TTGAATCTTA ATATTGTAAT GT 
Length1172
Protein Sequence
Protein Residue
Map Locationscaffold_3: 5776339.. 5777711
Download Sequence
A.thaliana
AGI-codeAT3G14550.1
Descriptiongeranylgeranyl pyrophosphate synthase 3
TAIR curator summaryEncodes a protein with geranylgeranyl pyrophosphate synthase activity involved in isoprenoid biosynthesis. The enzyme appears to be targeted to the chloroplast in epidermal cells and guard cells of leaves, and in etioplasts in roots.
Alias[GGPS3][geranylgeranyl pyrophosphate synthase 3]
Gene coexpression
MR
MR Locus Description
8.3666 Ahg934835
8.83176 Ahg341583 Terpenoid cyclases/Protein prenyltransferases superfamily protein
9.48683 Ahg911203 fucosyltransferase 9
13.8564 Ahg921526
14.2478 Ahg323253
14.4222 Ahg951841
18.9737 Ahg948999
20.9284 Ahg951467
25.632 Ahg893976 Concanavalin A-like lectin protein kinase family protein
29.7993 Ahg937552
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression