Detail



ID : Ahg478900

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478900|fgenesh2_kg.3__1601__AT3G14850.2
Sequence
TCTTCTCTGT GTTAAAATGG GTTCAAGAGA TAACGCCATT TCTTATGGCT CTGCATTAGT TTTATCGCTT CTCCTTCTTC TCCTCCACGA AGCAGAGGGA TGTGATATGT TCACGGGGCG GTGGGTGAAG GACGATTCTT ACCCACTCTA CGATCCCTCC ACGTGTCCAT TCATAAGACG TGAGTTCGGT TGCAAGAAAA ATGGACGGCC AGATCTCGAT TACTCTACCT TCAGATGGCA GCCTCTGTCC TGCAAATTAG CAAGGTTCAA TGGAGTGGAG TTTTTGGAGA AAAACAAAGG GAAGAAGATA ATGTTTGTTG GTGATTCTCT CAGCCTAAAT CAATGGCAAT CTTTGACATG TATGCTTCAC TCTTCTGTTC CCAATTCTTC GTATACTTTA ACCACACAAG GTAGTATCTC AACCTTCACA TTCCAGGAGT ATGGACTGGA ATTGAAGCTT GATAGGAATG TATACTTAGT AGATATAGTG AGGGAGAAGA TTGGGAGAGT TTTGAAGCTT GATTCGATCA ATGATGGAAA AAATTGGTCA GAAATGGATA CTTTGATTTT CAATACTTGG CATTGGTGGA GCCGGAGAGG TCCTGCACAA CCATGGGATT ATATTCAAAT AGGGACTAAC GTTACAAAAG ACATGGACCG TGTTGCTGCA TTTGAGATCG CACTTGGGAC TTGGGGAAAA TGGGTTGATA CCGTCGTAGA TACTAAGAAA ACTAGAGTCT TTTTTCAAGG AATTTCACCG TCTCATTACA AAGGAGTTCT GTGGGGCGAA CCAGCGGCAA AGAGTTGCGT GGGACAGAAG GAACCACTTT TGGGGCCAAA TTATCCAGGA GGATTACCAG CAGAAGTGGG AGTTTTGAAG AGAGCACTCG GGAATATATC CAAACCGGTG ACATTGCTAG ACATTACGAT GCTTTCGTTG CTTCGCAAAG ATGCTCATCC TTCGGTTTAC GGTCTAGGTG GCCAAAAGTC CTGTGACTGC AGCCACTGGT GTCTCTCTGG CGTACCGGAT ACTTGGAATG AGATTCTTTA CAATTATATG ATTGAGTAAA AGAAAAATTA TAGCATTTGT TATTGTGATT GAT 
Length1103
Protein Sequence
Protein Residue
Map Locationscaffold_3: 5877218.. 5879240
Download Sequence
A.thaliana
AGI-codeAT3G14850.2
DescriptionTRICHOME BIREFRINGENCE-LIKE 41
TAIR curator summaryEncodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).
Alias[TBL41][TRICHOME BIREFRINGENCE-LIKE 41]
Gene coexpression
MR
MR Locus Description
30.2324 Ahg327188 DNAJ heat shock N-terminal domain-containing protein
53.2353 Ahg358487 Protein with RING/U-box and TRAF-like domains
75.5116 Ahg311290 Phosphatidylinositol-4-phosphate 5-kinase, core
83.9583 Ahg494390 senescence-associated gene 12
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression