Detail



ID : Ahg478975

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478975|fgenesh2_kg.3__1676__AT3G15370.1
Sequence
TATCTATGGA TATGAAAGGA AAATATTTGG TAACGGTTAT TCTCTTGGTT GGTACGTTAA GTGTGGGGAT GTGTTCTAAC GGTTGGATAA GAGCTCATGC AACGTATTAT GGTGTTAATG ATAGCCCTGC TTCACTTGGA GGAGCTTGTG GGTATGACAA TCCGTACCAC GCCGGATTCG GAGCCCACAC GGCGGCGCTA AGCGGTGCGT TATTCAGAAG CGGCGAGTCT TGCGGTGGGT GCTACCAGGT GAGGTGCGAC TATCCGGCGG ATCCTAAGTG GTGTCTCCGT GGAGCCACCG TGAGGGTGAC GGCTACAAAC TTTTGTCCGT CGAACAACAA TAATGGTTGG TGCAATCTCC CTCGCCATCA CTTTGACATG TCCTCCCCAG CTTTCTTCCG AATCGCCCGT CGCGGCAATG AAGGCATCGT CCCTGTCTTC TATCGCCGGG TGGGATGCAA AAGAAGAGGA GGCGTGAGGT TTACGTTGAG AGGGCAAGGT AACTTCAATA TGGTAATGAT CTCAAACGTT GGCGGTGGCG GCTCGGTGAG AGCGGTAGCG GTAAGAGGCT CAAAGGGAAA GACTTGGCTT CAGATGACCC GTAATTGGGG TGCCAACTGG CAGAGCTCCG GCGATCTCCG GGGACAGAGA CTCTCCTTCA AAGTTACTCT GACTGACAGC AAAACGCAGA CGTTTTTGAA CGTTGTTCCT TCTTCTTGGT GGTTTGGCCA AACCTTCTCT TCTCGAGGAC GCCAGTTCGT TTAACTACAA AACTAAGTCG TGCTCTGGTC AAAACGCAAT TCTTTGCTTG TTTATGAACT TGCCCTTGTT TTAATTGGGC AATGTTCCTT CGTTTTTCT 
Length859
Protein Sequence
Protein Residue
Map Locationscaffold_3: 6097959.. 6099704
Download Sequence
A.thaliana
AGI-codeAT3G15370.1
Descriptionexpansin 12
TAIR curator summarymember of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)
Alias[ATEXP12][ATEXPA12][ATHEXP ALPHA 1.24][EXP12][EXPA12][expansin 12][EXPANSIN 12]
Gene coexpression
MR
MR Locus Description
2.64575 Ahg932829
4.79583 Ahg945082 Galactose oxidase/kelch repeat superfamily protein
5.38516 Ahg495662 protein kinase C-like zinc finger protein
7.74597 Ahg493352 HXXXD-type acyl-transferase family protein
11.3578 Ahg897604
12.7279 Ahg337343
13.7477 Ahg931060
16.2481 Ahg351641 Major facilitator superfamily protein
16.9706 Ahg936781
18 Ahg481945 LOB domain-containing protein 13
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression