Detail



ID : Ahg479060

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479060|fgenesh2_kg.3__1761__AT3G16050.1
Sequence
GACGAACATT CTCAGAAGCT TCTAGACCAA ACCACACTCT TCTTCTTCTC CATTCTCTCT ATAATTCTCC TCACTTTCCA CGCAGCTTTC TCGTTCTCGT CTCAGATCGT GTTACTAACA AACAACATTT CTCCGGCGAA AAGCTCTCTG TTACTAACAA CCTAAAAATG GCGGATCAAG CTATGACTGA TCAAGAACAA GGAGCTGTTA CTCTCTACAG CGGCGCAGCC ATCACCGACG CGAAGAAAAA CCATCCGTTC TCTGTTAAGG TTGGATTAGC TCAAGTACTT CGTGGCGGCG CCATTGTTGA GGTTTCTTCT GTTAACCAGG CTAAGATCGC TGAATCCGCA GGCGCATGTT CTGTTATCGT CTCAGATCCG GTTCGATCTC GCGGTGGTGT TCGTCGTATG CCGGATCCGG TTCTTATCAA AGAGGTGAAA CGAGCTGTGT CTGTACCTGT GATGGGACGA GCTCGCGTTG GTCATTTCGT TGAGGCTCAG ATCTTGGAAT CTCTTGCGGT TGATTACATT GACGAGAGCG AGATTATCTC TGTAGCGGAC GAAGATCATT TCATCAACAA ACACAATTTC CGATCTCCGT TCATTTGTGG TTGCCGTGAT ACAGGAGAAG CTTTGAGGAG AATCAGAGAA GGTGCTGCTA TGATCAGGAT CCAAGGAGAT TTAACCGCAA CAGGTAATAT TGCAGAGACT GTGAAGAACG TTAGGTCATT GATGGGTGAA GTTAGAGTCT TGAACAACAT GGATGATGAT GAGGTGTTTA CATTTGCTAA GAAGATATCA GCACCGTATG ATCTTGTGGC TCAGACTAAG CAGATGGGTA GGGTTCCGGT GGTTCAGTTC GCATCAGGTG GGATCACGAC TCCTGCTGAT GCAGCTTTGA TGATGCAGCT TGGTTGTGAT GGAGTTTTCG TTGGTTCTGA GGTTTTTGAT GGTCCTGATC CGTTTAAGAA GCTTAGGAGC ATTGTTCAAG CTGTTCAACA TTACAATGAT CCTCATGTGT TGGCTGAGAT GAGTTCTGGG TTGGAGAATG CAATGGAGAG CTTAAATGTT CGTGGTGACA GGATTCAGGA TTTTAGCCAA GGAAGTGTTT GATGGGAAGG TTCAAGTTGC AAACTTTTTG GGACTTCTAA AGTCGTAATC TTTTTTGGTT TGACTATTAA AATATCGGTT GTTTTTTGTT AATGCTGGTG CATGCATATG ATCCTTTTGG TTTAATTAAA GCTTGCAACA ACTAAAACCA TAATGAAA 
Length1268
Protein Sequence
Protein Residue
Map Locationscaffold_3: 6383410.. 6384676
Download Sequence
A.thaliana
AGI-codeAT3G16050.1
Descriptionpyridoxine biosynthesis 1.2
TAIR curator summaryEncodes a protein with pyridoxal phosphate synthase activity whose transcripts were detected mostly in roots and accumulate during senescence. The protein was found in very low abundance, which prevented a specific localisation.
Alias[A37][ATPDX1.2][PDX1.2][ARABIDOPSIS THALIANA PYRIDOXINE BIOSYNTHESIS 1.2][pyridoxine biosynthesis 1.2]
Gene coexpression
MR
MR Locus Description
4 Ahg887974 Ras-related small GTP-binding family protein
4 Ahg923495
8.7178 Ahg915761 ECA1 gametogenesis related family protein
11.6189 Ahg359541 Protein of unknown function DUF2359, transmembrane
12.9615 Virus3251
13.4164 Ahg935009 Protein of unknown function (DUF288)
16 Ahg951127 Carbohydrate-binding X8 domain superfamily protein
20.4939 Ahg921362
27.2213 Virus2059
27.2213 Virus2990
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression