Detail



ID : Ahg479107

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479107|fgenesh2_kg.3__1808__AT3G16470.2
Sequence
TTCAATCTTC ATCTCAATTT CTCACACTCA AAGGTTATAT TTCTCTCTTC CCTTTAAGGT TAAGAGAAGG AAAAAATGGC GAAAAAGTTG GAAGCGCAAG GTGGTCGTGG AGGAGAAGAA TGGGACGATG GTGGTGCTTA CGAAAACGTC AAGAAAGTCT ATGTTGGTCA AGGTGATTCT GGTGTTGTTT ACGTCAAGTT TGATTACGAG AAAGATGGCA AAATCGTATC ACGTGAACAT GGCAAGCAGA CACTACTTGG AACAGAGGAG TTTGTGCTTG ATCCAGAAGA TTACTTAACA TCAGTGAAAG TTTACTACGA GAAGCTCTTT GGATCACCGA TAGAGATCGT TACGGCTCTA ATCTTTAAGA CATTCAAGGG GAAAACTTCT CAGCCTTTTG GACTAACCTC TGGAGAAGAA GCTGAGCTAG GAGGTGGCAA GATCGTTGGA TTTCATGGAA GTTCAAGTGA TCTGATCCAT TCTGTAGGAG TTTATATAAT TCCGTCAACT ACGCCAGTGA CTCCGCCGGT ATCAGGTGGT CCGACCAAAT TGGAAGCTCA AGGTGGTCGT GGAGGAGATG TATGGGACGA TGGTGGTGCT TACGACAATG TAAAGAAAGT TTATGTTGGA CAAGGTGACT CTGGTGTGGT TTATGTCAAG TTTGATTACG AGAAAGATGG TAAGATTGTA TCACTTGAAC ATGGGAAGCA GACACTACTT GGAACAGAGG AGTTTGAGAT TGATCCGGAA GACTACATCA CATATGTGAA AGTTTACTAC GAGAAACTTT TCGGGTCACC GATAGAGATT GTCACAGCTC TTATATTCAA GACATTCAAG GGGAAAACTT CTCAGCCGTT TGGACTAACC TCTGGAGAAG AAGCTGAGCT AGGAGGTGGC AAAATTGTTG GATTCCATGG AACTTCAAGC GATCTGATCC ATTCTCTAGG AGCTTATATT GTTCCTTCGT CCACACCATT GACTCCTTCT TCCAATACTA TTCCAGCACA AGGTGGAGAT GGTGGAGTTG CTTGGGATGA TGGTGTTCAC GACAGTGTCA AGAAGATATA TGTTGGACAA GGTGACTCTT GTGTCACATA TTTCAAGGCT GACTATGAAA AGGCATCAAA GCCTGTCCTT GGAAGTGATC ATGGAAAGAT GTCATTGCTT GGAGCAGAGG AGTTTGTGCT TGGACCAGAT GAGTACATCA CGGCTGTGTC GGGCTACTAT GACAAGATTT TTAGTGTAGA TGCGCCGGCA ATCGTCTCGC TTAAGTTCAA GACAAACAAG AGAACATCTA TCCCGTATGG ACTCGAGGGC GGAACTGAAT TCGTGCTGGA GAAGAAAGAC CACAAAATCG TTGGTTTCAA TGGACAAGCT GGTGACTATC TTTACAAACT TGGAGTCAAT GTTGCGCCCA TAGCTAACTG ATGTGAAAAC AATCTCATAT CCCCGGAATT CGAATAAGAT TATGTTGTGA GTTTATGGAG TTGTGTGGTC TAATGTTGTA TTTGGTTTTT TGTTTATCTA AAATCTAAAT AAAGAGGGTT TATGCATTGT GTGACTTTGA ACAAACTTCC TTTGTTAAAA TGAATAACAA ATCACAT 
Length1607
Protein Sequence
Protein Residue
Map Locationscaffold_3: 6565560.. 6567688
Download Sequence
A.thaliana
AGI-codeAT3G16470.1
DescriptionMannose-binding lectin superfamily protein
TAIR curator summaryJA-responsive gene
Alias[JAL35][JR1][jacalin-related lectin 35][JASMONATE RESPONSIVE 1]
Gene coexpression
MR
MR Locus Description
1 Ahg482953 jacalin-related lectin 23
1.41421 Ahg474364 beta glucosidase 18
2 Ahg474322 myrosinase-binding protein 2
2.64575 Ahg474531 GDSL-like Lipase/Acylhydrolase superfamily protein
3 Ahg474366 TSK-associating protein 1
4.24264 Ahg493370 beta-amylase 5
4.69042 Ahg937417 jacalin-related lectin 23
6.9282 Ahg484907 lipoxygenase 2
7.07107 Ahg355235 hydroperoxide lyase 1
9.32738 Ahg914363 Mannose-binding lectin superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression