Detail



ID : Ahg479116

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479116|fgenesh2_kg.3__1817__AT3G16530.1
Sequence
ATCATCAATC TTTCAATCAC AAAAAACAAC AACAACATTA AAAAAAAAAA ACACTCACAC AATGCAGATT CACAAACTCT GTTTTCTTGT TCTGTTCTTA GCTAACGCAG CTTTTGCCGT CAAATTCAAC TTCAGATCCT TCGATGGCAA CAACTTGCTA TTCCTAGGAG ACGCAGAGCT TGGTCCTTCC TCTGATGGTG TAAGCCGATC CGGAGCTTTA TCCATGACCC GAGACGAGAA CCCATTCTCT CACGGTCAAG GTCTTTACAT CAATCAAATC CCATTCAAAC CTTCAAACAC TTCTTCTCCT TTTTCATTTG AAACTTCTTT CACTTTCTCC ATCACTCCTC GCACCAAACC TAACTCCGGT CAAGGTCTCG CCTTCATCAT AGTCGCGGAA GCTGATAACT CCGGTGCTTC GGGTGGCGGA TATCTCGGAA TCCTCAACAA AACCAACGAT GGAAAGCCAG AGAACCACAT CTTGGCTATC GAATTCGATA CTTTCCAGAA CAAAGAGTTT CTAGACATTA GTGGTAACCA TGTCGGAGTT AACATCAACT CGATGACTTC TCTTGTCGCT GAGAAAGCTG GTTACTGGGT TCAGACAAGA GTCGGTAAAA GGAAAGTTTG GTCGTTTAAA GATGTGAATC TTAGCAGTGG AGAGAGGTTC AAGGCTTGGG TTGAGTTCAG AAGCAAAGAC TCAACGATTA CGGTTACGCT CGCGCCTGAA AACGTTAAGA AACCTAAGAG GGCTTTGATC GAAGCTCCCA GAGTGCTCAA TGAAGTTCTT CTTCAAAACA TGTACGCTGG TTTTGCTGGT TCCATGGGAC GTGCAGTTGA GCGTCACGAC ATTTGGAGCT GGTCGTTTGA AAACGCCGCC AAAAACAACT AAACCGGTTT GGTGTATCGT TTGCTTTGTG GTTTAAATAA AACAAGCCGA ATGTGTGGCT TAATTACTTG GCATTGCCAT ATTTCATATT TGTATTCAGT CTGAATAATT CAGATAT 
Length1007
Protein Sequence
Protein Residue
Map Locationscaffold_3: 6078743.. 6078926
Download Sequence
A.thaliana
AGI-codeAT3G16530.1
DescriptionLegume lectin family protein
TAIR curator summaryLectin like protein whose expression is induced upon treatment with chitin oligomers.
Alias
Gene coexpression
MR
MR Locus Description
17.1464 Ahg495000 conserved peptide upstream open reading frame 4
17.6635 Ahg941577 Raffinose synthase family protein
25.8844 Ahg929930
29.1204 Ahg948802 Serine protease inhibitor, potato inhibitor I-type family protein
29.7993 Ahg485744 C2H2-type zinc finger family protein
32.5115 Ahg339683 GNS1/SUR4 membrane protein family
35.4965 Ahg929526 COBRA-like protein 8 precursor
36.606 Ahg489775 Peroxidase superfamily protein
39.4588 Ahg478781 Glycosyl hydrolases family 32 protein
49.8397 Ahg902555 Plant invertase/pectin methylesterase inhibitor superfamily
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression