Detail



ID : Ahg479117

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479117|fgenesh2_kg.3__1818__AT3G16540.1
Sequence
ATGGTTTTCC GGCCGTGTGT TGATATGGTG GGGTGGTACA CGAGAGCTCG GGTTCCTGGT TTACTCTCTT CTCTTTTCTT TTACCGAAGT TGCAATAATG TACTGACCAA TTCACTGCCA ACGGTAACAA CTGCCGGCCG AGTTTCCAGA TATGACTATC TATGCAGGAG GAGCACATCA GCAGCAGAGA GGGGTGTAGT TCTTCCATTT GCGTTAACTG GCCGAAGAAA GATCCATTCA ATACATGAAG ATGCGAAGAA GCTAGAACGG TGGAAGAAAA TAGAAGAAAG TCGTCCTGTT GATGAATTGG TGCTGGATTC GGTTGTAGAG GTATTCTCTG ACTCTACCGG GTATAGAAAA TCCAAACCTT GGCAGACTTG TTACAAGAAA GAGCGAGATA AGCTTGAGAG AAAGGGCACT GGATTTGCAA TCGCGGGAAA GAAAATTCTT ACGAACGCTC ATGTGGTGAT GGCTATGAAT GATCACACAT TCGTGGATGT CAAAAGACAT GGCTCTCAAA TCAAATACAA AGCAAAAGTT CAAAAGATTT CACATGAATG TGATTTGGCC ATCTTGGAGA TCGATAGTGA CGAGTTTTGG AAGGGTATGA ATCCCTTGGA GCTTGGAGAC ATACCACCTC TCGGTGATTA TGGGAAACAA AGTCGTTGGT GTAATAATCA ATTTGCATAC ATTTGTATCA AGAGGTGGCA ATCTCTCGAA AATGTTCAAA TCCGTAATCA TTACAAGATG AGCCATGAAA TGACAGGAAT TCTTATAAAC AAAATAAACT CGTCGTCGGG GGCTTACAAA ATTTTGAGAA AAGACGACAT TATTCTTGCA ATTGATGGTG TTCCAATAGG AAATGATGAG AAAGTTCCTT TCCAAAACAA AAGACGGATA GATTTCAGCT ACTTGGTTTC TATGAAGAAA CCAGGTGAAA AAGCCTTAGT TAAAGTTTTA CGAAACGGAA AAGAGTATGA AACTTCTAAC ATCAATGCCA CAATCTCTCG TATGATTAGC AAAATTAATT CAGTGAAACC AAACTTTACA GTGCAACAAT TTTATAATCT TCCAAGTTAC TACATATTTG GGGGTTTTGT TTTTGTGCCT CTCACTAAAA CATATCTTGA TAGTGAACAT CACCAAATAT TAGCAGATGA CATCAACGAA GGATACCAAA GTTTAGATGG TGCTCAGGTG GAGAAAGTGA ACGGAGTGGA AGTAAAGAAT CTCAAGCATC TATGCGAGCT AATAGAGGAA TGTAGCACTG AAGATTTGAG GCTGGACTTT AAAAATCATA AAGTTTTGGT CCTCAACTAT GAAACTGCTA AAAAAGCAAC GTTACAAATC TTGGAACGTC ACAAAATAAA GTCGTTCATA TCTAAGGACA TTTGTCTTCC TATGTTGCTT GATGATCCGT TCAAAGACAA TACGATAAAC CTTCTTCCTT GGAGTGTTCT TCCTTTGATG TTTGATTTTT CCTAA 
Length1485
Protein Sequence
Protein Residue
Map Locationscaffold_3: 6599348.. 6606995
Download Sequence
A.thaliana
AGI-codeAT3G16540.1
DescriptionDegP protease 11
TAIR curator summaryEncodes a putative DegP protease.
Alias[DEG11][DegP11][degradation of periplasmic proteins 11][DegP protease 11]
Gene coexpression
MR
MR Locus Description
31.4643 Ahg914942
35.9305 Ahg892274 SGNH hydrolase-type esterase superfamily protein
36.6606 Ahg909475
44.8999 Ahg936648
46.1086 Ahg494262
46.4758 Ahg941033 C2H2-type zinc finger family protein
53.1037 Ahg929611
54.7723 Ahg930837 F-box and associated interaction domains-containing protein
70.0071 Ahg910245 Domain of unknown function (DUF313)
72.2496 Ahg930229
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression