Detail



ID : Ahg479131

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479131|fgenesh2_kg.3__1832__AT3G16650.1
Sequence
CCTATTTCCC TCTCTTCTCT CCGTCTCTTT CGTTCTGATT CTGATTGTTC GTGTAAAACC CTAGATGACG ATGCTAAGTT TGAGCACGGA AGTCGATACT CAGTCACTGA AAAAACTCAG CCTCAAATCT GTAACACGAG CTCGTGAACT TTTCTCCCCC GTCCATGGCC AATTTCCTCC GCCTGATCCT GAAAGCAAAA GAATTCGGCT CTGCCATAAG ATTCAAGTTT CATTTGGAGG CGTAGAACCT GCAAGTAAGC CTACACGTAG TGCTGAACAT AACAGTGAAA AGACGGCTCC ATCGAATGCC CTTGCCCTTC CAGGTCCAGA AGGTTCCAAG GAACTTCGAA AAGGCACAAC AGAGAAAGCT TTAGTTGTTG GTCCAACTTT ACCGTCAAGA GACTTGAACA ATACTGGTAA TCCAGGCAAA AGCACGGCCA TTCTTCCTGC ATCTGGATCC TTTTCTGAAA GAAATCTGTC AACTGCTGCT TTAATGGAGA GAATGCCTAG TAGATGGCCT CGTCCAGAGT GGCATGCACC ATGGAAGAAT TACAGGGTGA TCCAGGGACA CTTGGGTTGG GTCAGATCTG TTGCGTTTGA CCCAAGTAAT GAATGGTTTT GCACTGGTTC AGCTGATCGT ACCATCAAGA TATGGGATGT AGCGACCGGA GTTCTGAAAC TCACACTTAC TGGACATATA GGGCAAGTAC GAGGCCTCGC TGTAAGCAAT AGACATACCT ATATGTTTTC TGCTGGTGAT GACAAGCAAG TCAAATGCTG GGACCTTGAG CAGAATAAGG TTATTCGATC TTATCATGGT CATTTGCATG GCGTTTACTG TTTAGCTCTT CATCCAACGC TAGATGTTAT ACTAACCGGA GGGCGAGACT CTGTCTGCAG GGTATGGGAT ATCCGTACGA AGATGCAAAT TTTTGTACTC CCACATAACG CAGATGTTTT TTCCGTTGTA GCCCGTCCAA CTGATCCACA AGTTATTACA GGGTCTCATG ACTCAACCAT CAAATTTTGG GATCTCCGAT TTGGCAAATC GATGTTAAAT ATAACGAATC ATAAGAAGAC TGTCCGAGCA ATGGCTCTCC ATCCGAAAGA GAATGCTTTT GTTTCTGCAT CAGCTGACAA TATCAAGAAG TTTAGCCTTC CTAAGGGAGA GTTTTGCCAC AACATGCTTT CTCTGCAGAG AGACACAATT AACGCAGTGG CTGCGAACGA GGATGGCGTA ATGGCCACTG GAGGTGATAA AGGTGGCTTA TGGTTCTGGG ACTGGAAGAG TGGTCACAAT TTCCAACAGG CAGAAACTAT TGTACAGCCC GGTTCGCTGG AGAGTGAAGC CGGTATATAC GCAGCGTGTT ACGATAGGAC GGGTTCAAGG CTGTTAACGT GTGAGGCAGA CAAAACAATA AAGATGTGGA AGGAAGACGA GAATGCAACT CCTGAAACTC ATCCTCTCAA CTTCAAACCT CCCAAAGAGA TCAGACGCTT CTGAGGTTTC TCTCTCTTAC AAGTTACACC TCTCTAATCC CAAACTCGAA GTCAGAAAAA AAAACCACTA ATCTCACTCT GGATAAAAAA AAAAAACCTT GTTTATGTGA TATATTTTTA CCAGTTCTTC TTCAAGATAG AGAAGGGAAA ATAACAGCAT TGTAGTTTCT T 
Length1671
Protein Sequence
Protein Residue
Map Locationscaffold_3: 6671182.. 6675332
Download Sequence
A.thaliana
AGI-codeAT3G16650.1
DescriptionTransducin/WD40 repeat-like superfamily protein
TAIR curator summary
Alias[PRL2][Pleiotropic regulatory locus 2]
Gene coexpression
MR
MR Locus Description
23.0217 Ahg471034 glucose-6-phosphate dehydrogenase 4
25.7682 Ahg330259 COP1-interacting protein 4.1
27.7849 Ahg476174
28.3725 Ahg909381 tubulin-tyrosine ligases;tubulin-tyrosine ligases
29.3939 Ahg494624 Pentatricopeptide repeat (PPR) superfamily protein
35 Ahg347582 Transducin family protein / WD-40 repeat family protein
38.7298 Ahg488289 beta-1,4-N-acetylglucosaminyltransferase family protein
47.0744 Ahg935688 Peptide chain release factor 1
50.1597 Ahg936415
51.9711 Ahg891225
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression