| Annotation |
|---|
| Description | jgi|Araly1|479156|fgenesh2_kg.3__1857__AT3G16890.1 |
| Sequence |
ATGAGAGGCT TTGCTTCTTC AGCATCTAGA ATAGCGACGG CGGCAGCAGC TTCCAAAGCC CTAAACCCTA ACCTCTCAAA AACCCTAAAT TCCTCAGGTA AACCCACCAG TCCTCTGAAC CAGCGTTACA TTTCGCAAGT CATAGAGAGA AAAGATTGGT TTTTGATACT GAATCAAGAA TTCACCACTC ATCGAATTGG TTTAAACACT CGATTCGTCA TCAGCGTTTT GCAGAATCAA GACAACCCAT TACACTCCCT GCGATTTTAC CTCTGGGTCT CCAACACCGA CCCTGTTTAC GCTAAGGATC AGTCTCTGAA GAGCGTTCTA GGGAACGCAC TTTTTCGTAA AGGCCCTTTA TTGTTGTCTA TGGAATTGCT TAAGGAGATT AGAGAATCAG GGTATCGAAT TACTGATGAA TTGATGTGTG TTTTGATCGG AAGCTGGGGA AGATTAGGTT TAGCTAAGTA TTGTAATGAT CTTTTTGCTC AGATATCTTT TCTTGGAATG AAACCAAGTA CAAGGCTTTA TAATGCTGTG ATTGATGCGT TGGTGAAGTC TAATTCACTT GATTTGGCTT ACTTGAAGTT TCAGCAGATG CGTAGTGATG ATTGTAAACC GGATCGTTTT ACCTATAATA TACTCATCCA TGGTGTTTGC AAGAAGGGTG TGGTTGATGA GGCGATTCGA TTGGTTAAAC AGATGGAACG AGAAGGGAAC AGACCTAATG TGTTCACTTA TACGATTTTG ATTGACGGGT TTTTGATCGC GGGGAGGATT GAGGAGGCAT TGAAGCAATT GGAGATGATG CAGGCGAGAA AGTTGAATCC TAATGAAGCT ACAATTAGAA CTTTGGTTCA TGGGATTTTT CGTTGCTTGC CGCCGTGTGA AGCGTTTGAG GTTTTGCTTG GGTTTATGGA GAAAAACTCG ATTTTGCAAA GAGTAGCTTA TGATACTGTG TTGTATTGTC TTTCAAATAA CTCAATGGCT AAAGAGACTG CTCTTTTCTT GAGGAAAACG GGTGAGCGAG GTTATATTCC GGATAGCTCA ACGTTCAATG CTGCGATGAA TTGTCTCTTA AAAGGGCATG ATCTGGTTGA GACGTGTGGG ATATTTGACG GTTTTGTCAG TCGTGGAGTT AAGCCAGGAT TTAACGGTTA TCTTGTATTA GTTCAAGCTC TGTTGAATGC TCAGAGGTTC TCTGAAGGTG ACCGGTATCT GAAACAACTG GGTGTTGATG GGCTTCTATC AAGTGTATAT ACTTATAATG CGGTTATTGA CTGTCTCTGC AAGGCTCGTC GGACAGAGCA TGCAGCAATG TTCTTAACAG AGATGCAGGA TAGAGGTATT TCTCCGAATC TCATAACTTT CAATACTTTT CTAAGCGGTT ATAGCGCGGG GGGCGATGTA AAGAAGGTTC ACGGCGTGCT AGAGAAGCTT CTTGAACATG GTTGCAAACC AGACGTGATC ACTTTCAGTT TGATCATAAA CTGTCTTTGC CGAGCAAAAG AAATCAAAGA TGCATTTGAC TGTTTCAAGG AGATGTTGGA ATGGGGGATT AAACCAAATG AGATCACATA CAATATCCTG ATTCGCTCCT CTTGTTCAAC CGGAGATACC GGTAGATCAG TGAAGCTGTT TGCGAATATG AAGGAAAGCG GGTTAAGTCC AGACCTTTAT GCCTACAATG CGATTATTCA GAGTTTTTGC AAGATGAAAA AGGTTAAGAA GGCTGAGGAA TTGCTTAAAA CAATGTTGAG GATTGGTTTG AAACCAGATA ACTTTACATA CAGCACTCTC ATCAAAGCTC TAAGTGAATC TGGAAGAGAG AGTGAAGCGA GAGAGATGTT CAGTTCAGTG GAAAGACATG GATGTGTTCC GGATTCATAT AGTAAGCGTC TTGTTGAAGA ACTTAACCTT AGACAAAGTG GACTCTCGAG AGAAACCGTG TCAGCCTCAT AG |
| Length | 1962 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 6801385.. 6803346 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G16890.1 |
| Description | pentatricopeptide (PPR) domain protein 40 |
| TAIR curator summary | Encodes a mitochondrial pentatricopeptide repeat (PPR) domain protein, PPR40, which provides a signalling link between mitochondrial electron transport and regulation of stress and hormonal responses. Mutations in PPR40 result in enhanced sensitivity to salt, ABA and oxidative stress, as well as reduced electron transport through Complex III (cytochrome c reductase). |
| Alias | [PPR40][pentatricopeptide (PPR) domain protein 40] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 17.3205 |
Ahg894712 | |
| 30.6431 |
Ahg894546 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| 43.9773 |
Ahg485847 | SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein |
| 49.97 |
Ahg485126 | TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 |
| 51.5267 |
Ahg497488 | eukaryotic translation initiation factor 2 |
| 52.2303 |
Ahg898366 | DNA binding;ATP binding;nucleic acid binding;binding;helicases;ATP binding;DNA binding;helicases |
| 64.7457 |
Ahg330061 | CRM family member 3B |
| 65.4981 |
Ahg936256 | |
| 67.9706 |
Ahg946021 | glycine-rich protein |
| 68.775 |
Ahg328471 | Enhancer of polycomb-like transcription factor protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|